Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23e23
         (603 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0490 - 17724878-17725045,17725264-17725342,17725434-177254...    30   1.2  
04_04_0410 - 25010455-25011819                                         28   5.0  

>08_02_0490 -
           17724878-17725045,17725264-17725342,17725434-17725498,
           17725569-17725657,17725750-17725858,17725969-17726047,
           17727247-17727512
          Length = 284

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +3

Query: 153 PNADKTEMSSVTYTDFIEAAKNFIEISNRCC 245
           P +D T M SV     +EA+K+F+E  N CC
Sbjct: 83  PTSDDTSMLSVGLISLVEASKDFMESVN-CC 112


>04_04_0410 - 25010455-25011819
          Length = 454

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 405 WNSAGMLLSLDDIRTMSLISINKKDFYSVVTQQE 506
           W+ AGM  SLDD R +  I++  +    V+ Q +
Sbjct: 316 WSDAGMAASLDDKRVLHAIAMEDERSVCVINQYD 349


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,557,009
Number of Sequences: 37544
Number of extensions: 248914
Number of successful extensions: 549
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)