Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23e23
         (603 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC043295-1|AAH43295.1|  642|Homo sapiens zinc finger protein 398...    30   5.4  
AY049744-1|AAK92789.1|  642|Homo sapiens zinc finger DNA binding...    30   5.4  

>BC043295-1|AAH43295.1|  642|Homo sapiens zinc finger protein 398
           protein.
          Length = 642

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
 Frame = +3

Query: 291 RKETFLNYKNGDYERLLKADYVIFYKE--SYCVPSFSFNVWNSAGMLLSLDDIRTMSLIS 464
           +KE + N   G+YE L+  DY I   +  S   P    N  + AG   S           
Sbjct: 164 QKELYKNIMKGNYESLISMDYAINQPDVLSQIQPEGEHNTEDQAGPEESEIPTDPSEEPG 223

Query: 465 INKKDFYSVVTQQEHP 512
           I+  D  S + Q+E P
Sbjct: 224 ISTSDILSWIKQEEEP 239


>AY049744-1|AAK92789.1|  642|Homo sapiens zinc finger DNA binding
           protein p71 protein.
          Length = 642

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
 Frame = +3

Query: 291 RKETFLNYKNGDYERLLKADYVIFYKE--SYCVPSFSFNVWNSAGMLLSLDDIRTMSLIS 464
           +KE + N   G+YE L+  DY I   +  S   P    N  + AG   S           
Sbjct: 164 QKELYKNIMKGNYESLISMDYAINQPDVLSQIQPEGEHNTEDQAGPEESEIPTDPSEEPG 223

Query: 465 INKKDFYSVVTQQEHP 512
           I+  D  S + Q+E P
Sbjct: 224 ISTSDILSWIKQEEEP 239


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,474,794
Number of Sequences: 237096
Number of extensions: 1417164
Number of successful extensions: 3176
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3176
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)