Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23e23
         (603 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023823-1|AAZ86744.1|  212|Drosophila melanogaster RH23185p pro...    60   2e-09
BT022398-1|AAY54814.1|  172|Drosophila melanogaster IP05430p pro...    60   2e-09
AY071278-1|AAL48900.1|  347|Drosophila melanogaster RE30702p pro...    29   3.7  
AE013599-522|AAF59181.3|  130|Drosophila melanogaster CG12821-PA...    28   8.5  

>BT023823-1|AAZ86744.1|  212|Drosophila melanogaster RH23185p
           protein.
          Length = 212

 Score = 60.5 bits (140), Expect = 2e-09
 Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
 Frame = +3

Query: 174 MSSVTYTDFIEAAKNFIEISNRCCDGWKFIEHDKDK--CYLRKETFLNYKNG--DYERLL 341
           M  +++ DF+  AK F+EIS +  D W   + D ++   YL+    +  + G  +   L+
Sbjct: 41  MGDLSWKDFLSQAKQFLEISQKLGDNWILEQKDSNEPNTYLKCSQKIKCRGGKDNSAELV 100

Query: 342 KADYVIFYKESYCVPSFSFNVWNSAGMLLSLDDIRTMSLISINKKDFYSVVTQQEHPI 515
             +Y + +  SY VP   F    S G LL ++    M +      D + ++TQ +HP+
Sbjct: 101 SVEYHVVFSVSYQVPMLFFQAHRSDGSLLDVEATWRMFMPESKASDLHQILTQMDHPV 158



 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 523 RPYFIIHPCHTESVLAAFKDKSKNIIV 603
           RP+  +HPC T  VL  F   S N ++
Sbjct: 161 RPFMALHPCRTAEVLKQFGKPSCNQVL 187


>BT022398-1|AAY54814.1|  172|Drosophila melanogaster IP05430p
           protein.
          Length = 172

 Score = 60.5 bits (140), Expect = 2e-09
 Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
 Frame = +3

Query: 174 MSSVTYTDFIEAAKNFIEISNRCCDGWKFIEHDKDK--CYLRKETFLNYKNG--DYERLL 341
           M  +++ DF+  AK F+EIS +  D W   + D ++   YL+    +  + G  +   L+
Sbjct: 1   MGDLSWKDFLSQAKQFLEISQKLGDNWILEQKDSNEPNTYLKCSQKIKCRGGKDNSAELV 60

Query: 342 KADYVIFYKESYCVPSFSFNVWNSAGMLLSLDDIRTMSLISINKKDFYSVVTQQEHPI 515
             +Y + +  SY VP   F    S G LL ++    M +      D + ++TQ +HP+
Sbjct: 61  SVEYHVVFSVSYQVPMLFFQAHRSDGSLLDVEATWRMFMPESKASDLHQILTQMDHPV 118



 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 523 RPYFIIHPCHTESVLAAFKDKSKNIIV 603
           RP+  +HPC T  VL  F   S N ++
Sbjct: 121 RPFMALHPCRTAEVLKQFGKPSCNQVL 147


>AY071278-1|AAL48900.1|  347|Drosophila melanogaster RE30702p
           protein.
          Length = 347

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 20/66 (30%), Positives = 31/66 (46%)
 Frame = -1

Query: 435 PMTTTCQPSSKH*N*RMEHNNSPCKILHNQLSINVHNHRFYNSKMFLYVNSIYLYRVQ*I 256
           P TTT   ++ H N    ++N+ C   H  L  N HN+   N+   L  N+ Y       
Sbjct: 199 PTTTTTLCTNNHNNLCTNNHNNLCTNNHYNLCTNNHNNLCTNNHNNLCTNNHYNLCT--- 255

Query: 255 SNHHNI 238
           +NH+N+
Sbjct: 256 NNHNNL 261


>AE013599-522|AAF59181.3|  130|Drosophila melanogaster CG12821-PA
           protein.
          Length = 130

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 523 RPYFIIHPCHTESVLAAFKDKSKNIIV 603
           RP+  +HPC T  VL  F   S N ++
Sbjct: 79  RPFMALHPCRTAEVLKQFGKPSCNQVL 105


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,418,885
Number of Sequences: 53049
Number of extensions: 481934
Number of successful extensions: 985
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)