BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23e19
(532 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023928-1|ABB36432.1| 1549|Drosophila melanogaster RE59252p pro... 28 6.9
AF334032-1|AAK09434.1| 1549|Drosophila melanogaster no-mechanore... 28 6.9
AF334031-1|AAK09433.1| 1557|Drosophila melanogaster no-mechanore... 28 6.9
AE013599-1269|AAM68729.1| 1557|Drosophila melanogaster CG13207-P... 28 6.9
AE013599-1268|AAF58668.2| 1557|Drosophila melanogaster CG13207-P... 28 6.9
AE013599-1267|AAS64916.1| 1549|Drosophila melanogaster CG13207-P... 28 6.9
AE013599-1266|AAM68728.2| 1549|Drosophila melanogaster CG13207-P... 28 6.9
AY060766-1|AAL28314.1| 458|Drosophila melanogaster GH22974p pro... 28 9.1
AE013599-3774|AAF47138.1| 458|Drosophila melanogaster CG11388-P... 28 9.1
>BT023928-1|ABB36432.1| 1549|Drosophila melanogaster RE59252p protein.
Length = 1549
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 335 SSGRLASAFDDGSEPIYTDP 276
S+ + + F+D SEPIYTDP
Sbjct: 1506 STNQSSHQFEDPSEPIYTDP 1525
>AF334032-1|AAK09434.1| 1549|Drosophila melanogaster
no-mechanoreceptor potential Ashort isoform protein.
Length = 1549
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 335 SSGRLASAFDDGSEPIYTDP 276
S+ + + F+D SEPIYTDP
Sbjct: 1506 STNQSSHQFEDPSEPIYTDP 1525
>AF334031-1|AAK09433.1| 1557|Drosophila melanogaster
no-mechanoreceptor potential Along isoform protein.
Length = 1557
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 335 SSGRLASAFDDGSEPIYTDP 276
S+ + + F+D SEPIYTDP
Sbjct: 1506 STNQSSHQFEDPSEPIYTDP 1525
>AE013599-1269|AAM68729.1| 1557|Drosophila melanogaster CG13207-PB,
isoform B protein.
Length = 1557
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 335 SSGRLASAFDDGSEPIYTDP 276
S+ + + F+D SEPIYTDP
Sbjct: 1506 STNQSSHQFEDPSEPIYTDP 1525
>AE013599-1268|AAF58668.2| 1557|Drosophila melanogaster CG13207-PA,
isoform A protein.
Length = 1557
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 335 SSGRLASAFDDGSEPIYTDP 276
S+ + + F+D SEPIYTDP
Sbjct: 1506 STNQSSHQFEDPSEPIYTDP 1525
>AE013599-1267|AAS64916.1| 1549|Drosophila melanogaster CG13207-PD,
isoform D protein.
Length = 1549
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 335 SSGRLASAFDDGSEPIYTDP 276
S+ + + F+D SEPIYTDP
Sbjct: 1506 STNQSSHQFEDPSEPIYTDP 1525
>AE013599-1266|AAM68728.2| 1549|Drosophila melanogaster CG13207-PC,
isoform C protein.
Length = 1549
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 335 SSGRLASAFDDGSEPIYTDP 276
S+ + + F+D SEPIYTDP
Sbjct: 1506 STNQSSHQFEDPSEPIYTDP 1525
>AY060766-1|AAL28314.1| 458|Drosophila melanogaster GH22974p
protein.
Length = 458
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 304 SSKALARRPDEPASSPSPNVLPRPLEYLI 390
+ K AR PD PA++PS + RP YL+
Sbjct: 110 AEKQEARYPDIPATTPSVPPVLRPTHYLL 138
>AE013599-3774|AAF47138.1| 458|Drosophila melanogaster CG11388-PA
protein.
Length = 458
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 304 SSKALARRPDEPASSPSPNVLPRPLEYLI 390
+ K AR PD PA++PS + RP YL+
Sbjct: 110 AEKQEARYPDIPATTPSVPPVLRPTHYLL 138
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,546,557
Number of Sequences: 53049
Number of extensions: 406210
Number of successful extensions: 1404
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1404
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1991467008
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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