Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23e18
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456904-1|CAG33185.1|  106|Homo sapiens NDUFS5 protein.               50   7e-06
BC093057-1|AAH93057.1|  106|Homo sapiens NADH dehydrogenase (ubi...    50   7e-06
BC001884-1|AAH01884.1|  106|Homo sapiens NADH dehydrogenase (ubi...    50   7e-06
AL606465-3|CAI16711.1|  106|Homo sapiens NADH dehydrogenase (ubi...    50   7e-06
AF020352-1|AAB87866.1|  106|Homo sapiens NADH:ubiquinone oxidore...    50   7e-06

>CR456904-1|CAG33185.1|  106|Homo sapiens NDUFS5 protein.
          Length = 106

 Score = 49.6 bits (113), Expect = 7e-06
 Identities = 26/74 (35%), Positives = 37/74 (50%)
 Frame = +1

Query: 199 ITGGMIDFQILGRCGKQEMDLMNCIEAYGLGRGIKKCKGYIDDYGECRTLTKQLKRFLAI 378
           I  G   +++ GRC   E + + C    G  R  K+CK   DD+ EC    K ++R   I
Sbjct: 20  IQSGEQPYKMAGRCHAFEKEWIECAHGIGYTRAEKECKIEYDDFVECLLRQKTMRRAGTI 79

Query: 379 RKERQRQIACGKLT 420
           RK+R + I  GK T
Sbjct: 80  RKQRDKLIKEGKYT 93


>BC093057-1|AAH93057.1|  106|Homo sapiens NADH dehydrogenase
           (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q
           reductas protein.
          Length = 106

 Score = 49.6 bits (113), Expect = 7e-06
 Identities = 26/74 (35%), Positives = 37/74 (50%)
 Frame = +1

Query: 199 ITGGMIDFQILGRCGKQEMDLMNCIEAYGLGRGIKKCKGYIDDYGECRTLTKQLKRFLAI 378
           I  G   +++ GRC   E + + C    G  R  K+CK   DD+ EC    K ++R   I
Sbjct: 20  IQSGEQPYKMAGRCHAFEKEWIECAHGIGYTRAEKECKIEYDDFVECLLRQKTMRRAGTI 79

Query: 379 RKERQRQIACGKLT 420
           RK+R + I  GK T
Sbjct: 80  RKQRDKLIKEGKYT 93


>BC001884-1|AAH01884.1|  106|Homo sapiens NADH dehydrogenase
           (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q
           reductas protein.
          Length = 106

 Score = 49.6 bits (113), Expect = 7e-06
 Identities = 26/74 (35%), Positives = 37/74 (50%)
 Frame = +1

Query: 199 ITGGMIDFQILGRCGKQEMDLMNCIEAYGLGRGIKKCKGYIDDYGECRTLTKQLKRFLAI 378
           I  G   +++ GRC   E + + C    G  R  K+CK   DD+ EC    K ++R   I
Sbjct: 20  IQSGEQPYKMAGRCHAFEKEWIECAHGIGYTRAEKECKIEYDDFVECLLRQKTMRRAGTI 79

Query: 379 RKERQRQIACGKLT 420
           RK+R + I  GK T
Sbjct: 80  RKQRDKLIKEGKYT 93


>AL606465-3|CAI16711.1|  106|Homo sapiens NADH dehydrogenase
           (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q
           reductas protein.
          Length = 106

 Score = 49.6 bits (113), Expect = 7e-06
 Identities = 26/74 (35%), Positives = 37/74 (50%)
 Frame = +1

Query: 199 ITGGMIDFQILGRCGKQEMDLMNCIEAYGLGRGIKKCKGYIDDYGECRTLTKQLKRFLAI 378
           I  G   +++ GRC   E + + C    G  R  K+CK   DD+ EC    K ++R   I
Sbjct: 20  IQSGEQPYKMAGRCHAFEKEWIECAHGIGYTRAEKECKIEYDDFVECLLRQKTMRRAGTI 79

Query: 379 RKERQRQIACGKLT 420
           RK+R + I  GK T
Sbjct: 80  RKQRDKLIKEGKYT 93


>AF020352-1|AAB87866.1|  106|Homo sapiens NADH:ubiquinone
           oxidoreductase 15 kDa IP subunit protein.
          Length = 106

 Score = 49.6 bits (113), Expect = 7e-06
 Identities = 26/74 (35%), Positives = 37/74 (50%)
 Frame = +1

Query: 199 ITGGMIDFQILGRCGKQEMDLMNCIEAYGLGRGIKKCKGYIDDYGECRTLTKQLKRFLAI 378
           I  G   +++ GRC   E + + C    G  R  K+CK   DD+ EC    K ++R   I
Sbjct: 20  IQSGEQPYKMAGRCHAFEKEWIECAHGIGYTRAEKECKIEYDDFVECLLRQKTMRRAGTI 79

Query: 379 RKERQRQIACGKLT 420
           RK+R + I  GK T
Sbjct: 80  RKQRDKLIKEGKYT 93


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,996,666
Number of Sequences: 237096
Number of extensions: 1279792
Number of successful extensions: 1964
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1964
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)