Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23e12
(661 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132949-1|CAB61068.2| 463|Caenorhabditis elegans Hypothetical ... 33 0.18
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 32 0.41
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 32 0.41
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 32 0.41
Z74028-6|CAI91174.1| 674|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z74028-5|CAA98427.1| 677|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z81124-3|CAB03373.1| 341|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z81500-4|CAB04097.1| 254|Caenorhabditis elegans Hypothetical pr... 28 5.1
AL117204-24|CAB55152.1| 298|Caenorhabditis elegans Hypothetical... 28 6.8
>AL132949-1|CAB61068.2| 463|Caenorhabditis elegans Hypothetical
protein Y53F4B.1 protein.
Length = 463
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +1
Query: 238 EDGCAESQVVLAKQLLEEKCELEADKISNFKQALEWLICATEQAHPEARRLLRR 399
ED CA Q K +K ++ K ++ + +EW + T+++ P ++LL +
Sbjct: 249 EDDCAVGQRAFLKMYNNKKYDMSGCKSNSICETIEWCLNNTQESRPTFKQLLSK 302
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 31.9 bits (69), Expect = 0.41
Identities = 28/107 (26%), Positives = 47/107 (43%)
Frame = +1
Query: 259 QVVLAKQLLEEKCELEADKISNFKQALEWLICATEQAHPEARRLLRRCIRSGVIDEDSAA 438
+V +KQL++ K LEA ++ LE E+ RR + + +E +
Sbjct: 1028 EVERSKQLVKAKARLEAT-VAEINDELE-----KEKQQRHNAETARRAAETQLREEQESC 1081
Query: 439 IVRAKSCLAASRQETVARKAARDLFASLSNGEQYITTVQLERRIREI 579
+ + + + Q + RK + S+ N E+ QLER IREI
Sbjct: 1082 LEKTRKAEELTNQ--LMRKESELSQISIRNDEELAARQQLEREIREI 1126
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 31.9 bits (69), Expect = 0.41
Identities = 28/107 (26%), Positives = 47/107 (43%)
Frame = +1
Query: 259 QVVLAKQLLEEKCELEADKISNFKQALEWLICATEQAHPEARRLLRRCIRSGVIDEDSAA 438
+V +KQL++ K LEA ++ LE E+ RR + + +E +
Sbjct: 1028 EVERSKQLVKAKARLEAT-VAEINDELE-----KEKQQRHNAETARRAAETQLREEQESC 1081
Query: 439 IVRAKSCLAASRQETVARKAARDLFASLSNGEQYITTVQLERRIREI 579
+ + + + Q + RK + S+ N E+ QLER IREI
Sbjct: 1082 LEKTRKAEELTNQ--LMRKESELSQISIRNDEELAARQQLEREIREI 1126
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 31.9 bits (69), Expect = 0.41
Identities = 28/107 (26%), Positives = 47/107 (43%)
Frame = +1
Query: 259 QVVLAKQLLEEKCELEADKISNFKQALEWLICATEQAHPEARRLLRRCIRSGVIDEDSAA 438
+V +KQL++ K LEA ++ LE E+ RR + + +E +
Sbjct: 1028 EVERSKQLVKAKARLEAT-VAEINDELE-----KEKQQRHNAETARRAAETQLREEQESC 1081
Query: 439 IVRAKSCLAASRQETVARKAARDLFASLSNGEQYITTVQLERRIREI 579
+ + + + Q + RK + S+ N E+ QLER IREI
Sbjct: 1082 LEKTRKAEELTNQ--LMRKESELSQISIRNDEELAARQQLEREIREI 1126
>Z74028-6|CAI91174.1| 674|Caenorhabditis elegans Hypothetical
protein C14C10.3b protein.
Length = 674
Score = 31.1 bits (67), Expect = 0.72
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 436 AIVRAKSCLAASRQETVARKAARDLFASLSNGEQYITTVQLERRIREI 579
A + K+CL A RQ D F L N + +VQ +++IRE+
Sbjct: 11 ATILNKTCLTAVRQSLKHTDGRFDYFRYLGNDASHAISVQKDQQIREV 58
>Z74028-5|CAA98427.1| 677|Caenorhabditis elegans Hypothetical
protein C14C10.3a protein.
Length = 677
Score = 31.1 bits (67), Expect = 0.72
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 436 AIVRAKSCLAASRQETVARKAARDLFASLSNGEQYITTVQLERRIREI 579
A + K+CL A RQ D F L N + +VQ +++IRE+
Sbjct: 11 ATILNKTCLTAVRQSLKHTDGRFDYFRYLGNDASHAISVQKDQQIREV 58
>Z81124-3|CAB03373.1| 341|Caenorhabditis elegans Hypothetical
protein T21B4.5 protein.
Length = 341
Score = 29.5 bits (63), Expect = 2.2
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = -1
Query: 235 LTDS*VDVVTLEVHVNSTVCVPRALPFN-SFIKH--KNMKGFQYILYIHNSCFI*K*FYL 65
LT V VV L VH+ +T CV + P N S +K +N+ + ++ I S F+ FYL
Sbjct: 30 LTSRTVGVVFLPVHILTTYCVLKKTPANMSSVKFSLENLSFWLFLSQILFSFFMMPSFYL 89
Query: 64 FVL 56
V+
Sbjct: 90 PVM 92
>Z81500-4|CAB04097.1| 254|Caenorhabditis elegans Hypothetical
protein F11D11.5 protein.
Length = 254
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 211 LRRLRNQLAEDGCAESQVVLAKQLLEEKCELEADKISN 324
L ++ Q+A++ C E VLA+ E+CE + + N
Sbjct: 131 LEKVTQQVAKERCIEESAVLARVETSEECEWKHGFVEN 168
>AL117204-24|CAB55152.1| 298|Caenorhabditis elegans Hypothetical
protein Y116A8C.37 protein.
Length = 298
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -1
Query: 622 NRCLRPLSSVTSYCKSLLSDVRVEPLLCIVHHSTNWQ 512
N+ + +T YC +L D LL V+H NW+
Sbjct: 208 NKKVESAVGMTEYCLEILPDGCSNSLLTTVYHMHNWR 244
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,402,807
Number of Sequences: 27780
Number of extensions: 299755
Number of successful extensions: 603
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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