Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23e09
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   2.2  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   2.9  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   2.9  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = +3

Query: 186 RSELKATQESETHLRIQVW*RSNQKRQPVKINIA*NIFIQSYL---LPPL 326
           R EL A +   T  RIQVW  + + R   +I  A    ++SY     PPL
Sbjct: 250 REEL-AQRTKLTEARIQVWFSNRRARLRKQITSAATPLVRSYAPERYPPL 298


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +2

Query: 179 PPAFGIEGYARIGNPLTNPSVVEI 250
           PP   + GYA +   L + +V  I
Sbjct: 375 PPIMNLNGYANVNRKLISSTVTSI 398


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +2

Query: 179 PPAFGIEGYARIGNPLTNPSVVEI 250
           PP   + GYA +   L + +V  I
Sbjct: 375 PPIMNLNGYANVNRKLISSTVTSI 398


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,849
Number of Sequences: 336
Number of extensions: 2517
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)