Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23e09
         (647 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0441 - 3363069-3363137,3363273-3363430,3363549-3363613,336...    32   0.45 
02_01_0405 - 2952434-2955583                                           29   2.4  
07_03_1567 - 27772815-27773302,27773471-27773561,27773641-277739...    28   7.4  
08_02_1354 - 26337628-26338540,26339638-26339981                       27   9.7  

>11_01_0441 -
           3363069-3363137,3363273-3363430,3363549-3363613,
           3363709-3363777,3363881-3363973,3364081-3364184,
           3364327-3364410,3364486-3364693,3364809-3364880,
           3365005-3365080,3365788-3365900,3366006-3366153,
           3366996-3367073,3367968-3368097,3368296-3368486,
           3368644-3368704,3368847-3368956,3369090-3369312
          Length = 683

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
 Frame = +2

Query: 179 PPAFGIEGYARIGNPLTNPSVVEIKPKTTAGQ-NKYCLKYL-----YSELFATAIEDAII 340
           P A G +G   +  P     VV +KP  TAG+ +K  L  L        + A  +EDA+I
Sbjct: 343 PVALGADGGGSVRMPAALCGVVGLKP--TAGRFSKDGLLPLNWTVGMPGILAATVEDALI 400

Query: 341 AYRILAESNSEMRIQKTLSDMPILLAKKYSVEQPAFADEL 460
           AY  +A+ +    +Q     +  LL   +   +  FA++L
Sbjct: 401 AYAAIADQSQPSHLQANARTLYFLL-HVWMFSETEFAEDL 439


>02_01_0405 - 2952434-2955583
          Length = 1049

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 20/45 (44%), Positives = 26/45 (57%)
 Frame = +2

Query: 464 SIDANNLKCTSYKLNKLNNDRLLFSDILIATYLGLSLLENWKSVD 598
           SI +N   CTS K+  LNN+   FS  LI  Y+  S L N K++D
Sbjct: 316 SIPSNLSNCTSLKIIDLNNNN--FSGELI--YVNFSNLPNLKTLD 356


>07_03_1567 -
           27772815-27773302,27773471-27773561,27773641-27773988,
           27774929-27775110,27775191-27775368,27775453-27775605,
           27775993-27776232,27776369-27776449,27776485-27776730,
           27777151-27777240,27777536-27777778,27778365-27778529,
           27779017-27779080,27779162-27779286,27779383-27779476,
           27779647-27779714,27779798-27779989,27780618-27780752,
           27780847-27780934,27781014-27781107,27781484-27781547,
           27781657-27781708,27781911-27782014,27782099-27782158,
           27782687-27782770,27782892-27783125,27783442-27783864,
           27784675-27784736,27784867-27785521
          Length = 1700

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +2

Query: 362 SNSEMRIQKTLSDMPILLAKKYSVEQPAFADELDSIDANNL 484
           S  E+ +     +M + L K+YS  +  FAD +  +D ++L
Sbjct: 483 SREEVEVHDVGKEMELDLIKQYSQVERIFADRVSKVDGDDL 523


>08_02_1354 - 26337628-26338540,26339638-26339981
          Length = 418

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 218 NPLTNPSVVEIKPKTTAGQNKYC 286
           NP  +PS     P TT G+++YC
Sbjct: 164 NPSPSPSPATRSPSTTLGRDRYC 186


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,927,952
Number of Sequences: 37544
Number of extensions: 246471
Number of successful extensions: 421
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 421
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)