Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23e07
         (566 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   3.2  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   3.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   5.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   9.7  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   9.7  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +2

Query: 332 AANNSPSKRSASQNLPPTMRPTKNMRRET 418
           A  ++PS  + +  LPP +   ++ RR T
Sbjct: 258 ATGSAPSPTAGAGGLPPQVPSPRSQRRYT 286


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +3

Query: 288 IYYNKVTSWGLYPGTLLTI 344
           IY+N++  W +  G + T+
Sbjct: 149 IYFNRIFGWNILFGHIFTV 167


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 95  DHFNSYSCVCASNT 136
           D  NS+SC C S T
Sbjct: 239 DLVNSFSCSCPSGT 252


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 507 PHIIMYIHGTKR 472
           P II+ +HGT+R
Sbjct: 325 PDIIIDVHGTRR 336


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +2

Query: 341 NSPSKRSASQNLPPTMRPTKNMRR 412
           N+P  +  + NLPP   P  +  R
Sbjct: 229 NNPKNKQHNFNLPPGAIPVPDKNR 252


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,585
Number of Sequences: 336
Number of extensions: 2668
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)