Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23e07
         (566 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC011396-1|AAH11396.2|  661|Homo sapiens pseudouridylate synthas...    30   6.5  
BC005209-1|AAH05209.3|  311|Homo sapiens PUS7 protein protein.         30   6.5  
AK000492-1|BAA91203.1|  205|Homo sapiens protein ( Homo sapiens ...    30   6.5  
AC073138-1|AAS07447.1|  195|Homo sapiens unknown protein.              30   6.5  
AB067484-1|BAB67790.1|  645|Homo sapiens KIAA1897 protein protein.     30   6.5  

>BC011396-1|AAH11396.2|  661|Homo sapiens pseudouridylate synthase 7
           homolog (S. cerevisiae) protein.
          Length = 661

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
 Frame = +3

Query: 129 QIHDAALRTGPRKISSNAHNQSYKTRS*--VVIFIFNRDIDSIP*KYPDIVL*QFIYYNK 302
           +I D +L    RKI     N S++  +     I +FN D+D++  K P +   +  Y   
Sbjct: 564 KIRDYSLSGAYRKIIIRPQNVSWEVVAYDDPKIPLFNTDVDNLEGKTPPVFASEGKYRAL 623

Query: 303 VTSWGLYPGTLLTIALAREVLR 368
              + L P T  T+A+ REVL+
Sbjct: 624 KMDFSLPPSTYATMAI-REVLK 644


>BC005209-1|AAH05209.3|  311|Homo sapiens PUS7 protein protein.
          Length = 311

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
 Frame = +3

Query: 129 QIHDAALRTGPRKISSNAHNQSYKTRS*--VVIFIFNRDIDSIP*KYPDIVL*QFIYYNK 302
           +I D +L    RKI     N S++  +     I +FN D+D++  K P +   +  Y   
Sbjct: 214 KIRDYSLSGAYRKIIIRPQNVSWEVVAYDDPKIPLFNTDVDNLEGKTPPVFASEGKYRAL 273

Query: 303 VTSWGLYPGTLLTIALAREVLR 368
              + L P T  T+A+ REVL+
Sbjct: 274 KMDFSLPPSTYATMAI-REVLK 294


>AK000492-1|BAA91203.1|  205|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20485 fis, clone KAT07835. ).
          Length = 205

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
 Frame = +3

Query: 129 QIHDAALRTGPRKISSNAHNQSYKTRS*--VVIFIFNRDIDSIP*KYPDIVL*QFIYYNK 302
           +I D +L    RKI     N S++  +     I +FN D+D++  K P +   +  Y   
Sbjct: 108 KIRDYSLSGAYRKIIIRPQNVSWEVVAYDDPKIPLFNTDVDNLEGKTPPVFASEGKYRAL 167

Query: 303 VTSWGLYPGTLLTIALAREVLR 368
              + L P T  T+A+ REVL+
Sbjct: 168 KMDFSLPPSTYATMAI-REVLK 188


>AC073138-1|AAS07447.1|  195|Homo sapiens unknown protein.
          Length = 195

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
 Frame = +3

Query: 129 QIHDAALRTGPRKISSNAHNQSYKTRS*--VVIFIFNRDIDSIP*KYPDIVL*QFIYYNK 302
           +I D +L    RKI     N S++  +     I +FN D+D++  K P +   +  Y   
Sbjct: 98  KIRDYSLSGAYRKIIIRPQNVSWEVVAYDDPKIPLFNTDVDNLEGKTPPVFASEGKYRAL 157

Query: 303 VTSWGLYPGTLLTIALAREVLR 368
              + L P T  T+A+ REVL+
Sbjct: 158 KMDFSLPPSTYATMAI-REVLK 178


>AB067484-1|BAB67790.1|  645|Homo sapiens KIAA1897 protein protein.
          Length = 645

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
 Frame = +3

Query: 129 QIHDAALRTGPRKISSNAHNQSYKTRS*--VVIFIFNRDIDSIP*KYPDIVL*QFIYYNK 302
           +I D +L    RKI     N S++  +     I +FN D+D++  K P +   +  Y   
Sbjct: 548 KIRDYSLSGAYRKIIIRPQNVSWEVVAYDDPKIPLFNTDVDNLEGKTPPVFASEGKYRAL 607

Query: 303 VTSWGLYPGTLLTIALAREVLR 368
              + L P T  T+A+ REVL+
Sbjct: 608 KMDFSLPPSTYATMAI-REVLK 628


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,606,201
Number of Sequences: 237096
Number of extensions: 1496427
Number of successful extensions: 2456
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2456
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)