Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23e06
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   6.5  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.6  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = +2

Query: 227 LRKHVRGLVYFIHWHNV 277
           +  H+ G    +HWH V
Sbjct: 188 VENHIEGNEVTLHWHGV 204


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = +2

Query: 227 LRKHVRGLVYFIHWHNV 277
           +  H+ G    +HWH V
Sbjct: 188 VENHIEGNEVTLHWHGV 204


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -1

Query: 164 HILQEYLCPF*SRSSEQKNYADYLR 90
           H+LQEY C F  R      Y   ++
Sbjct: 275 HLLQEYRCIFSLRPGLTHKYTHEIK 299


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 251 VYFIHWHNVMKCD 289
           VY++H+  +M CD
Sbjct: 341 VYWMHFRGLMDCD 353


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = +2

Query: 260  IHWHNVMKCDLKAIDYGCTDIGV 328
            IHW  ++   + ++ YG   + V
Sbjct: 1353 IHWQKIIIIVMSSVTYGIDTVAV 1375


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,256
Number of Sequences: 336
Number of extensions: 3451
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)