Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23e06
         (635 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    27   0.20 
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    25   0.47 

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +2

Query: 401 NCVPLNTDIWEAKTTEAMLTYIGKERTKMIVKNKMYN 511
           N VP++ D W  KT   +L   G   +  ++ NK+ N
Sbjct: 64  NNVPIDVDRWNGKTFVTILRNDGVPSSLNVISNKIGN 100


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 410 PLNTDIWEAKTTEAMLTYIGKERTKMIVKNKMYN 511
           PL+ D W  KT  A++ Y G   +  +V +K  N
Sbjct: 71  PLDVDQWHNKTFLAVIRYNGVPSSLNVVSDKTGN 104


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,908
Number of Sequences: 438
Number of extensions: 3740
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)