Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23e05
(639 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK025480-1|BAB15146.1| 355|Homo sapiens protein ( Homo sapiens ... 100 9e-21
CR457344-1|CAG33625.1| 304|Homo sapiens FLJ21827 protein. 98 2e-20
BC022856-1|AAH22856.1| 304|Homo sapiens C11orf60 protein protein. 98 2e-20
BC012802-1|AAH12802.1| 304|Homo sapiens C11orf60 protein protein. 98 2e-20
BC011647-1|AAH11647.1| 304|Homo sapiens C11orf60 protein protein. 98 2e-20
AJ249980-1|CAB96537.1| 304|Homo sapiens hypothetical protein pr... 98 2e-20
BC034980-1|AAH34980.1| 603|Homo sapiens Unknown (protein for IM... 31 2.6
AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein. 31 2.6
AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein. 31 2.6
AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein. 31 2.6
BC005079-1|AAH05079.1| 574|Homo sapiens chromosome 2 open readi... 31 3.4
BC002825-1|AAH02825.1| 574|Homo sapiens chromosome 2 open readi... 31 3.4
AK000565-1|BAA91258.1| 574|Homo sapiens protein ( Homo sapiens ... 31 3.4
AF225988-1|AAF35390.1| 1980|Homo sapiens voltage-gated sodium ch... 31 3.4
AF050736-1|AAD15789.1| 1980|Homo sapiens voltage-gated sodium ch... 31 3.4
AC016700-2|AAX93192.1| 574|Homo sapiens unknown protein. 31 3.4
AB027567-1|BAA78033.1| 1980|Homo sapiens sodium channel protein. 31 3.4
>AK025480-1|BAB15146.1| 355|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21827 fis, clone HEP01387. ).
Length = 355
Score = 99.5 bits (237), Expect = 9e-21
Identities = 49/113 (43%), Positives = 67/113 (59%)
Frame = +3
Query: 285 KVTKAGSERPKASSKRNDSSNSETDSGEMERERPDPLIGSGRKRGGVVIPAEGAYDPKLY 464
K K E + + +R S N + D + + D + G P EGAYDP Y
Sbjct: 63 KHRKEKKETSQLTPQRGFSENEDDDDDDDDSSETDSDSDDDDEEHGA--PLEGAYDPADY 120
Query: 465 QDLKVPPEMENIFQYIMKYTPQKIDIDFKLQPFVPEYVPAVGDIDAFLKVTTP 623
+ L V E++ +FQYI +YTPQ ID+D KL+PF+P+++PAVGDIDAFLKV P
Sbjct: 121 EHLPVSAEIKELFQYISRYTPQLIDLDHKLKPFIPDFIPAVGDIDAFLKVPRP 173
>CR457344-1|CAG33625.1| 304|Homo sapiens FLJ21827 protein.
Length = 304
Score = 98.3 bits (234), Expect = 2e-20
Identities = 47/100 (47%), Positives = 64/100 (64%)
Frame = +3
Query: 324 SKRNDSSNSETDSGEMERERPDPLIGSGRKRGGVVIPAEGAYDPKLYQDLKVPPEMENIF 503
S+ D + + DS E + + D + G P EGAYDP Y+ L V E++ +F
Sbjct: 30 SENEDDDDDDDDSSETDSDSDD----DDEEHGA---PLEGAYDPADYEHLPVSAEIKELF 82
Query: 504 QYIMKYTPQKIDIDFKLQPFVPEYVPAVGDIDAFLKVTTP 623
QYI +YTPQ ID+D KL+PF+P+++PAVGDIDAFLKV P
Sbjct: 83 QYISRYTPQLIDLDHKLKPFIPDFIPAVGDIDAFLKVPRP 122
>BC022856-1|AAH22856.1| 304|Homo sapiens C11orf60 protein protein.
Length = 304
Score = 98.3 bits (234), Expect = 2e-20
Identities = 47/100 (47%), Positives = 64/100 (64%)
Frame = +3
Query: 324 SKRNDSSNSETDSGEMERERPDPLIGSGRKRGGVVIPAEGAYDPKLYQDLKVPPEMENIF 503
S+ D + + DS E + + D + G P EGAYDP Y+ L V E++ +F
Sbjct: 30 SENEDDDDDDDDSSETDSDSDD----DDEEHGA---PLEGAYDPADYEHLPVSAEIKELF 82
Query: 504 QYIMKYTPQKIDIDFKLQPFVPEYVPAVGDIDAFLKVTTP 623
QYI +YTPQ ID+D KL+PF+P+++PAVGDIDAFLKV P
Sbjct: 83 QYISRYTPQLIDLDHKLKPFIPDFIPAVGDIDAFLKVPRP 122
>BC012802-1|AAH12802.1| 304|Homo sapiens C11orf60 protein protein.
Length = 304
Score = 98.3 bits (234), Expect = 2e-20
Identities = 47/100 (47%), Positives = 64/100 (64%)
Frame = +3
Query: 324 SKRNDSSNSETDSGEMERERPDPLIGSGRKRGGVVIPAEGAYDPKLYQDLKVPPEMENIF 503
S+ D + + DS E + + D + G P EGAYDP Y+ L V E++ +F
Sbjct: 30 SENEDDDDDDDDSSETDSDSDD----DDEEHGA---PLEGAYDPADYEHLPVSAEIKELF 82
Query: 504 QYIMKYTPQKIDIDFKLQPFVPEYVPAVGDIDAFLKVTTP 623
QYI +YTPQ ID+D KL+PF+P+++PAVGDIDAFLKV P
Sbjct: 83 QYISRYTPQLIDLDHKLKPFIPDFIPAVGDIDAFLKVPRP 122
>BC011647-1|AAH11647.1| 304|Homo sapiens C11orf60 protein protein.
Length = 304
Score = 98.3 bits (234), Expect = 2e-20
Identities = 47/100 (47%), Positives = 64/100 (64%)
Frame = +3
Query: 324 SKRNDSSNSETDSGEMERERPDPLIGSGRKRGGVVIPAEGAYDPKLYQDLKVPPEMENIF 503
S+ D + + DS E + + D + G P EGAYDP Y+ L V E++ +F
Sbjct: 30 SENEDDDDDDDDSSETDSDSDD----DDEEHGA---PLEGAYDPADYEHLPVSAEIKELF 82
Query: 504 QYIMKYTPQKIDIDFKLQPFVPEYVPAVGDIDAFLKVTTP 623
QYI +YTPQ ID+D KL+PF+P+++PAVGDIDAFLKV P
Sbjct: 83 QYISRYTPQLIDLDHKLKPFIPDFIPAVGDIDAFLKVPRP 122
>AJ249980-1|CAB96537.1| 304|Homo sapiens hypothetical protein
protein.
Length = 304
Score = 98.3 bits (234), Expect = 2e-20
Identities = 47/100 (47%), Positives = 64/100 (64%)
Frame = +3
Query: 324 SKRNDSSNSETDSGEMERERPDPLIGSGRKRGGVVIPAEGAYDPKLYQDLKVPPEMENIF 503
S+ D + + DS E + + D + G P EGAYDP Y+ L V E++ +F
Sbjct: 30 SENEDDDDDDDDSSETDSDSDD----DDEEHGA---PLEGAYDPADYEHLPVSAEIKELF 82
Query: 504 QYIMKYTPQKIDIDFKLQPFVPEYVPAVGDIDAFLKVTTP 623
QYI +YTPQ ID+D KL+PF+P+++PAVGDIDAFLKV P
Sbjct: 83 QYISRYTPQLIDLDHKLKPFIPDFIPAVGDIDAFLKVPRP 122
>BC034980-1|AAH34980.1| 603|Homo sapiens Unknown (protein for
IMAGE:4824581) protein.
Length = 603
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 249 PEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGE 368
P KA D ++ + ++G RP+ASSK S S T S E
Sbjct: 475 PNKARDRSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKE 514
>AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein.
Length = 1250
Score = 31.5 bits (68), Expect = 2.6
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +3
Query: 228 PDKKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGEMERERP 386
P P P+K+ K +K + G ++P + +RN S S + + E +RP
Sbjct: 944 PTASP-TPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAEHPEPKRP 995
>AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein.
Length = 1250
Score = 31.5 bits (68), Expect = 2.6
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +3
Query: 228 PDKKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGEMERERP 386
P P P+K+ K +K + G ++P + +RN S S + + E +RP
Sbjct: 944 PTASP-TPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAEHPEPKRP 995
>AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein.
Length = 1236
Score = 31.5 bits (68), Expect = 2.6
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +3
Query: 228 PDKKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGEMERERP 386
P P P+K+ K +K + G ++P + +RN S S + + E +RP
Sbjct: 930 PTASP-TPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAEHPEPKRP 981
>BC005079-1|AAH05079.1| 574|Homo sapiens chromosome 2 open reading
frame 42 protein.
Length = 574
Score = 31.1 bits (67), Expect = 3.4
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 631 SHAGVVTFRKASMSPTAGTYSGTNGCSLKSMSIFCGVYF 515
S G T R P GTY+GT G S K+ + CG F
Sbjct: 15 SDLGKATLRGIRKCPRCGTYNGTRGLSCKNKT--CGTIF 51
>BC002825-1|AAH02825.1| 574|Homo sapiens chromosome 2 open reading
frame 42 protein.
Length = 574
Score = 31.1 bits (67), Expect = 3.4
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 631 SHAGVVTFRKASMSPTAGTYSGTNGCSLKSMSIFCGVYF 515
S G T R P GTY+GT G S K+ + CG F
Sbjct: 15 SDLGKATLRGIRKCPRCGTYNGTRGLSCKNKT--CGTIF 51
>AK000565-1|BAA91258.1| 574|Homo sapiens protein ( Homo sapiens
cDNA FLJ20558 fis, clone KAT11870. ).
Length = 574
Score = 31.1 bits (67), Expect = 3.4
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 631 SHAGVVTFRKASMSPTAGTYSGTNGCSLKSMSIFCGVYF 515
S G T R P GTY+GT G S K+ + CG F
Sbjct: 15 SDLGKATLRGIRKCPRCGTYNGTRGLSCKNKT--CGTIF 51
>AF225988-1|AAF35390.1| 1980|Homo sapiens voltage-gated sodium
channel alpha subunit protein.
Length = 1980
Score = 31.1 bits (67), Expect = 3.4
Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +3
Query: 228 PDK-KPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGEMERERPDPLIGS 404
PD KP PE ++++ + + + S + +D + + ++E + P I
Sbjct: 11 PDSFKPFTPESLANIERRIAESKLKKPPKADGSHREDDEDSKPKPNSDLEAGKSLPFIYG 70
Query: 405 GRKRGGVVIPAEGAYDP 455
+G V +P E +DP
Sbjct: 71 DIPQGLVAVPLED-FDP 86
>AF050736-1|AAD15789.1| 1980|Homo sapiens voltage-gated sodium
channel alpha subunit protein.
Length = 1980
Score = 31.1 bits (67), Expect = 3.4
Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +3
Query: 228 PDK-KPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGEMERERPDPLIGS 404
PD KP PE ++++ + + + S + +D + + ++E + P I
Sbjct: 11 PDSFKPFTPESLANIERRIAESKLKKPPKADGSHREDDEDSKPKPNSDLEAGKSLPFIYG 70
Query: 405 GRKRGGVVIPAEGAYDP 455
+G V +P E +DP
Sbjct: 71 DIPQGLVAVPLED-FDP 86
>AC016700-2|AAX93192.1| 574|Homo sapiens unknown protein.
Length = 574
Score = 31.1 bits (67), Expect = 3.4
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 631 SHAGVVTFRKASMSPTAGTYSGTNGCSLKSMSIFCGVYF 515
S G T R P GTY+GT G S K+ + CG F
Sbjct: 15 SDLGKATLRGIRKCPRCGTYNGTRGLSCKNKT--CGTIF 51
>AB027567-1|BAA78033.1| 1980|Homo sapiens sodium channel protein.
Length = 1980
Score = 31.1 bits (67), Expect = 3.4
Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +3
Query: 228 PDK-KPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGEMERERPDPLIGS 404
PD KP PE ++++ + + + S + +D + + ++E + P I
Sbjct: 11 PDSFKPFTPESLANIERRIAESKLKKPPKADGSHREDDEDSKPKPNSDLEAGKSLPFIYG 70
Query: 405 GRKRGGVVIPAEGAYDP 455
+G V +P E +DP
Sbjct: 71 DIPQGLVAVPLED-FDP 86
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,611,471
Number of Sequences: 237096
Number of extensions: 1873008
Number of successful extensions: 5939
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5911
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -