Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23e05
(639 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50028-4|CAL36519.1| 298|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z50028-3|CAL36518.1| 320|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z50028-1|CAL36517.1| 471|Caenorhabditis elegans Hypothetical pr... 47 1e-05
DQ365983-1|ABD14368.1| 298|Caenorhabditis elegans intraflagella... 47 1e-05
DQ360813-1|ABC88650.1| 320|Caenorhabditis elegans intraflagella... 47 1e-05
DQ360812-1|ABC88649.1| 474|Caenorhabditis elegans intraflagella... 47 1e-05
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 33 0.13
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass... 31 0.53
Z81072-8|CAE17783.1| 143|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical pr... 31 0.70
U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical pr... 31 0.92
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 31 0.92
Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical pr... 30 1.2
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z49968-5|CAE47470.1| 1155|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z49968-4|CAA90261.1| 1156|Caenorhabditis elegans Hypothetical pr... 29 2.1
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 29 2.1
Z96102-2|CAI79216.1| 746|Caenorhabditis elegans Hypothetical pr... 29 2.8
U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical pr... 29 2.8
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 29 2.8
Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical p... 29 3.7
Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical pr... 29 3.7
U41994-8|AAK31524.1| 752|Caenorhabditis elegans Hypothetical pr... 29 3.7
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 29 3.7
AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP ... 29 3.7
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 29 3.7
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 28 6.5
Z22173-2|CAA80126.1| 327|Caenorhabditis elegans Hypothetical pr... 28 6.5
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 28 6.5
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 28 6.5
U29381-3|AAA68758.2| 617|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 28 6.5
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 28 6.5
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 28 6.5
Z82264-5|CAB05156.1| 404|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z79605-8|CAE18060.2| 340|Caenorhabditis elegans Hypothetical pr... 27 8.6
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 27 8.6
AL034489-11|CAL49453.1| 340|Caenorhabditis elegans Hypothetical... 27 8.6
AC024211-5|AAF36063.2| 1119|Caenorhabditis elegans Hypothetical ... 27 8.6
>Z50028-4|CAL36519.1| 298|Caenorhabditis elegans Hypothetical
protein F46F6.4d protein.
Length = 298
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +3
Query: 498 IFQYIMKYTPQKIDIDFKLQPFVPEYVPAVGDIDAFLKVTTP 623
I YI Y Q++++ +L+PF EY+PA+GD+D F+KV P
Sbjct: 81 ILTYIDAYKTQEVELRPQLRPFTIEYIPAMGDVDLFIKVPRP 122
>Z50028-3|CAL36518.1| 320|Caenorhabditis elegans Hypothetical
protein F46F6.4c protein.
Length = 320
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +3
Query: 498 IFQYIMKYTPQKIDIDFKLQPFVPEYVPAVGDIDAFLKVTTP 623
I YI Y Q++++ +L+PF EY+PA+GD+D F+KV P
Sbjct: 103 ILTYIDAYKTQEVELRPQLRPFTIEYIPAMGDVDLFIKVPRP 144
>Z50028-1|CAL36517.1| 471|Caenorhabditis elegans Hypothetical
protein F46F6.4a protein.
Length = 471
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +3
Query: 498 IFQYIMKYTPQKIDIDFKLQPFVPEYVPAVGDIDAFLKVTTP 623
I YI Y Q++++ +L+PF EY+PA+GD+D F+KV P
Sbjct: 254 ILTYIDAYKTQEVELRPQLRPFTIEYIPAMGDVDLFIKVPRP 295
>DQ365983-1|ABD14368.1| 298|Caenorhabditis elegans intraflagellar
transport proteinvariant c protein.
Length = 298
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +3
Query: 498 IFQYIMKYTPQKIDIDFKLQPFVPEYVPAVGDIDAFLKVTTP 623
I YI Y Q++++ +L+PF EY+PA+GD+D F+KV P
Sbjct: 81 ILTYIDAYKTQEVELRPQLRPFTIEYIPAMGDVDLFIKVPRP 122
>DQ360813-1|ABC88650.1| 320|Caenorhabditis elegans intraflagellar
transport proteinvariant b protein.
Length = 320
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +3
Query: 498 IFQYIMKYTPQKIDIDFKLQPFVPEYVPAVGDIDAFLKVTTP 623
I YI Y Q++++ +L+PF EY+PA+GD+D F+KV P
Sbjct: 103 ILTYIDAYKTQEVELRPQLRPFTIEYIPAMGDVDLFIKVPRP 144
>DQ360812-1|ABC88649.1| 474|Caenorhabditis elegans intraflagellar
transport proteinvariant a protein.
Length = 474
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +3
Query: 498 IFQYIMKYTPQKIDIDFKLQPFVPEYVPAVGDIDAFLKVTTP 623
I YI Y Q++++ +L+PF EY+PA+GD+D F+KV P
Sbjct: 257 ILTYIDAYKTQEVELRPQLRPFTIEYIPAMGDVDLFIKVPRP 298
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 234 KKPLVPEKANDVQKNVTKVTKAG--SERPKASSKRNDSSNSETDSGEMERERP 386
K+ PE+ ++V++ V K K S+ PK SKR ++S+ E + E E+E P
Sbjct: 270 KRAETPEEEDEVEEEVVKTPKKSKSSKSPK-KSKRAETSDEEDEDEEDEKEAP 321
>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily assigned
gene nameprotein 213 protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.53
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 201 GNTSLEDKVPDKKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSE--TDSGEME 374
G TS E V D + V + ++ +K T K +RP SS + S E T+ GE++
Sbjct: 1201 GTTSSEKVVKDDE--VHQNGSETEKKATVDNKERKKRPGKSSHGSKESKKEPTTEDGEVK 1258
Query: 375 RERPDP 392
P P
Sbjct: 1259 TPSPPP 1264
>Z81072-8|CAE17783.1| 143|Caenorhabditis elegans Hypothetical
protein F30A10.12 protein.
Length = 143
Score = 31.1 bits (67), Expect = 0.70
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +3
Query: 216 EDKVPDKKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGEME 374
E+K +KK E+ D +K +K +K S+ K+ K + S +E D GE E
Sbjct: 76 EEKKEEKKDEKEEEKKDEKKETSKKSKKASK--KSVKKSSKSKKNEGDDGEYE 126
>Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical
protein F25F2.1b protein.
Length = 584
Score = 31.1 bits (67), Expect = 0.70
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 234 KKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETD-SGEMERE 380
KK +K N ++K K K ER K R+ S++ E++ SGE +R+
Sbjct: 19 KKEKSTQKKNSLEKKNKKDKKKQKERKKKKEARDSSTSEESEESGESQRQ 68
>Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical
protein F25F2.1a protein.
Length = 581
Score = 31.1 bits (67), Expect = 0.70
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 234 KKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETD-SGEMERE 380
KK +K N ++K K K ER K R+ S++ E++ SGE +R+
Sbjct: 19 KKEKSTQKKNSLEKKNKKDKKKQKERKKKKEARDSSTSEESEESGESQRQ 68
>U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical
protein ZK354.7 protein.
Length = 224
Score = 30.7 bits (66), Expect = 0.92
Identities = 14/66 (21%), Positives = 30/66 (45%)
Frame = +3
Query: 216 EDKVPDKKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGEMERERPDPL 395
EDK DKK E+ + +K K K ++ + ++ND + E + + ++ +
Sbjct: 159 EDKKDDKKEAKKEEKKEEKKEEKKEEKKEEKKEEKKEEKNDENKEEKKEEKKDEKKEEKK 218
Query: 396 IGSGRK 413
+ +K
Sbjct: 219 VEEAKK 224
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 30.7 bits (66), Expect = 0.92
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 210 SLEDKVPDKKPLVPEKANDVQKNVTKVTKAGSERPKAS-SKRNDSSNSETDSGEMERERP 386
S E+K +K+ + E + + T V E PK + +++N SS + T+ E ++E P
Sbjct: 592 STEEKTEEKESVKVEDSTPEPEPETPVNSTSEESPKTNETEKNASSGNATEVKEKKKELP 651
>Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical
protein ZC376.8 protein.
Length = 278
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +3
Query: 213 LEDKVPDKKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGEMERERPD 389
+E+K +KKP P K+ +K K GS++ + K + SN D + ++ D
Sbjct: 77 IEEKGEEKKPEEPAKSKKSEKK-EKSKNEGSKKEEDKEKEKEKSNKAEDKKSEDPKKED 134
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 216 EDKVPDKKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSET 356
E+ D K EK +++K + K K + PK K+N+ ET
Sbjct: 596 EESSSDDKKSTDEKKKEIKK-IEKTNKVNHDEPKKEEKKNEEQVKET 641
>Z49968-5|CAE47470.1| 1155|Caenorhabditis elegans Hypothetical protein
M110.4b protein.
Length = 1155
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +3
Query: 201 GNTSLEDKVPDKKPLVPEKANDVQKNVT----KVTKAGSERPKA---SSKRNDSSNSETD 359
GNTS E VP K +ND +K T + A ++ A SS+R+ S NS TD
Sbjct: 868 GNTSSESAVPVKSAWGRRDSNDQRKKSTVDEKQAALAAAKEISAMSISSRRSTSQNSNTD 927
Query: 360 SGEME 374
+ E
Sbjct: 928 KTDDE 932
>Z49968-4|CAA90261.1| 1156|Caenorhabditis elegans Hypothetical protein
M110.4a protein.
Length = 1156
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +3
Query: 201 GNTSLEDKVPDKKPLVPEKANDVQKNVT----KVTKAGSERPKA---SSKRNDSSNSETD 359
GNTS E VP K +ND +K T + A ++ A SS+R+ S NS TD
Sbjct: 869 GNTSSESAVPVKSAWGRRDSNDQRKKSTVDEKQAALAAAKEISAMSISSRRSTSQNSNTD 928
Query: 360 SGEME 374
+ E
Sbjct: 929 KTDDE 933
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 216 EDKVPDKKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGE 368
ED+ +++ V E +V K V K+ K + + SSK +DSS+S + E
Sbjct: 137 EDEEEEEETDVEESIQEVPKKV-KIRKIKEKSGEKSSKSSDSSSSSSSDSE 186
>Z96102-2|CAI79216.1| 746|Caenorhabditis elegans Hypothetical
protein H39E23.3 protein.
Length = 746
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Frame = +3
Query: 216 EDKVPDKKPLVPEKANDVQKNVTKVTKAGSERPK---ASSKRNDSSNSETDSGEME 374
E K P K+ P K TK S++PK A S++N + E D + E
Sbjct: 42 EKKAPTKREADPPKTESADSEKKAPTKRESDKPKTESADSEKNAPAKREADKPKTE 97
>U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical
protein F47B3.4 protein.
Length = 281
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +3
Query: 213 LEDKVPDKKPLVP---EKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGEMERER 383
+E+K +KKP P +K+ +K+ + +K + K SK+++ SE D + + ++
Sbjct: 78 IEEKEVEKKPDEPAKSKKSEKKEKSKNEGSKKEESKDKEKSKKSEDKKSE-DPKKEDAKK 136
Query: 384 PD 389
PD
Sbjct: 137 PD 138
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 210 SLEDKVPDKKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGEMERERPD 389
S +DK +KK K + +K + + ++ +A KR ++ S+T+ E E ++ +
Sbjct: 302 SKKDKKKEKKEKKKSKKANKEKEERRARREQRKKERAELKRKINNRSDTEE-EWEEKQSE 360
Query: 390 PLIGS-GRKRGGVVIP 434
++G+ G + G + P
Sbjct: 361 KIVGTIGTWKEGSMSP 376
>Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical protein
T01H8.5d protein.
Length = 1931
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +3
Query: 234 KKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGEMERERPDPLIGSGRK 413
K+ + + NDV+ + V KA +E + + +N+ T G PDPL+ +
Sbjct: 1582 KESMGRDVINDVESRLASVEKAQNEILECVRALLNQNNAPTAIGRCFSPSPDPLVETANG 1641
Query: 414 RGGVVIPAEGAYDPKL 461
G ++ DP L
Sbjct: 1642 TPGPLLLKLPGTDPIL 1657
>Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical protein
T01H8.5c protein.
Length = 1971
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +3
Query: 234 KKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGEMERERPDPLIGSGRK 413
K+ + + NDV+ + V KA +E + + +N+ T G PDPL+ +
Sbjct: 1622 KESMGRDVINDVESRLASVEKAQNEILECVRALLNQNNAPTAIGRCFSPSPDPLVETANG 1681
Query: 414 RGGVVIPAEGAYDPKL 461
G ++ DP L
Sbjct: 1682 TPGPLLLKLPGTDPIL 1697
>Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical protein
T01H8.5a protein.
Length = 2032
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +3
Query: 234 KKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGEMERERPDPLIGSGRK 413
K+ + + NDV+ + V KA +E + + +N+ T G PDPL+ +
Sbjct: 1683 KESMGRDVINDVESRLASVEKAQNEILECVRALLNQNNAPTAIGRCFSPSPDPLVETANG 1742
Query: 414 RGGVVIPAEGAYDPKL 461
G ++ DP L
Sbjct: 1743 TPGPLLLKLPGTDPIL 1758
>Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +3
Query: 234 KKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGEMERERPDPLIGSGRK 413
K+ + + NDV+ + V KA +E + + +N+ T G PDPL+ +
Sbjct: 1582 KESMGRDVINDVESRLASVEKAQNEILECVRALLNQNNAPTAIGRCFSPSPDPLVETANG 1641
Query: 414 RGGVVIPAEGAYDPKL 461
G ++ DP L
Sbjct: 1642 TPGPLLLKLPGTDPIL 1657
>Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical protein
T01H8.5c protein.
Length = 1971
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +3
Query: 234 KKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGEMERERPDPLIGSGRK 413
K+ + + NDV+ + V KA +E + + +N+ T G PDPL+ +
Sbjct: 1622 KESMGRDVINDVESRLASVEKAQNEILECVRALLNQNNAPTAIGRCFSPSPDPLVETANG 1681
Query: 414 RGGVVIPAEGAYDPKL 461
G ++ DP L
Sbjct: 1682 TPGPLLLKLPGTDPIL 1697
>Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical protein
T01H8.5a protein.
Length = 2032
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +3
Query: 234 KKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGEMERERPDPLIGSGRK 413
K+ + + NDV+ + V KA +E + + +N+ T G PDPL+ +
Sbjct: 1683 KESMGRDVINDVESRLASVEKAQNEILECVRALLNQNNAPTAIGRCFSPSPDPLVETANG 1742
Query: 414 RGGVVIPAEGAYDPKL 461
G ++ DP L
Sbjct: 1743 TPGPLLLKLPGTDPIL 1758
>U41994-8|AAK31524.1| 752|Caenorhabditis elegans Hypothetical
protein F59A6.4 protein.
Length = 752
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +3
Query: 234 KKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGEMERERPDPL 395
KKP P + K+ TKV+ A + K + D E S R++P P+
Sbjct: 40 KKPTTPNGVANPTKSKTKVSTASTMNEKKGASTGDMKKKEPSS----RKKPSPM 89
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 217 KIRYQTRSRLCPRKRMMSR-KTLRRLPRQAARDPKRPPNVMILLILKQIAE 366
KI+ + +KR R K +R+L ++AARDP N LI K +AE
Sbjct: 177 KIKKDKKKAKKEKKREKKRAKKIRKLEKKAARDPDGDWNNKAKLIDKVVAE 227
>AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1971
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +3
Query: 234 KKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGEMERERPDPLIGSGRK 413
K+ + + NDV+ + V KA +E + + +N+ T G PDPL+ +
Sbjct: 1622 KESMGRDVINDVESRLASVEKAQNEILECVRALLNQNNAPTAIGRCFSPSPDPLVETANG 1681
Query: 414 RGGVVIPAEGAYDPKL 461
G ++ DP L
Sbjct: 1682 TPGPLLLKLPGTDPIL 1697
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 216 EDKVPDKKPLVPEKANDVQKNVTKVTKAGSERPKA-SSKRNDSSNSETDSGEMERERPD 389
E+K DKK ++ D +K +K +K S+ K+ SKR + + + E ++ D
Sbjct: 128 EEKKDDKKDEKKDEKKDEKKEKSKKSKKSSKSKKSKKSKREKKDEDKKEDDKKEDDKKD 186
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/63 (22%), Positives = 28/63 (44%)
Frame = +3
Query: 201 GNTSLEDKVPDKKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGEMERE 380
G+ EDK DKK ++ + K+ K ++ K ++ N+ N E + E +
Sbjct: 89 GHEKKEDKKEDKKENENDEKKEKSKDDKKEESKEDKKEKTKTEDNEGKNEEKKKEKKEEK 148
Query: 381 RPD 389
+ +
Sbjct: 149 KDE 151
>Z22173-2|CAA80126.1| 327|Caenorhabditis elegans Hypothetical
protein C15H7.4 protein.
Length = 327
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +3
Query: 222 KVPDK---KPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGEMERERPDP 392
K P K KPL+ E + T T + P + + +NSE D+GE E+ + +
Sbjct: 198 KTPSKTVTKPLLSESRKRKEAK-TLATTQSQDLPAPTKDEPERTNSEPDNGEQEKIKKEK 256
Query: 393 LIGS 404
G+
Sbjct: 257 KKGT 260
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 447 YDP-KLYQDLKVPPEMENIFQYIMKYTPQKIDIDFKLQPFVPEYV 578
YD LYQD V P + + MK ++D+D KL+ +P+ +
Sbjct: 1935 YDQYNLYQDCYVTPR-DQANPFAMKEKFSRLDVDHKLKTSIPQAI 1978
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 228 PDKKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGE 368
PDKK PEK + + TK T + PK S + + ++ + E
Sbjct: 1379 PDKKEKSPEKTEEKPASPTKKTGEEVKSPKEKSPASPTKKEKSPAAE 1425
>U29381-3|AAA68758.2| 617|Caenorhabditis elegans Hypothetical
protein F35D11.3 protein.
Length = 617
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3
Query: 136 LTGGLNLAIVALTTSSSLEGLSISLASTTTVSSYIGTFSGV 14
LTGGL +VA + + G +++ +TT ++ +GT GV
Sbjct: 234 LTGGLAAPLVAASAGMLIGGGAVAGLATTAGAAVLGTTMGV 274
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 228 PDKKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGE 368
PDKK PEK + + TK T + PK S + + ++ + E
Sbjct: 1379 PDKKEKSPEKTEEKPASPTKKTGEEVKSPKEKSPASPTKKEKSPAAE 1425
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 228 PDKKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGE 368
PDKK PEK + + TK T + PK S + + ++ + E
Sbjct: 1379 PDKKEKSPEKTEEKPASPTKKTGEEVKSPKEKSPASPTKKEKSPAAE 1425
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 228 PDKKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGE 368
PDKK PEK + + TK T + PK S + + ++ + E
Sbjct: 1379 PDKKEKSPEKTEEKPASPTKKTGEEVKSPKEKSPASPTKKEKSPAAE 1425
>Z82264-5|CAB05156.1| 404|Caenorhabditis elegans Hypothetical
protein C49C3.11 protein.
Length = 404
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = -1
Query: 471 DPDTAWDRTRLQLVSRRRLACDRCLSGGRVARVPFLRYLFQN*KNHYVWRTLWV 310
D D D V++++ +C+ G + F +Y F + VWR LW+
Sbjct: 25 DEDYMTDVPEKVSVTKKKKKVRKCVKRGFICCFKFCKYTFLCCRCVIVWRCLWL 78
>Z79605-8|CAE18060.2| 340|Caenorhabditis elegans Hypothetical
protein ZK678.8 protein.
Length = 340
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 237 SCLVPYLLRTCYPRSCQIPNRFDCQNRSRVALCVSPGD 124
S ++PYLL Y SC +P R C +S + L P D
Sbjct: 34 SWVIPYLLFANYLESCLLPLRVLCYTQSDL-LSTEPRD 70
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 216 EDKVPDKKPLVPEKANDVQKNVTKVTKAGSERPKA-SSKRNDSSNSETDSGEMERERPD 389
+DK +KK ++ D +K +K +K S+ K+ SKR + + + E ++ D
Sbjct: 132 DDKKDEKKDEKKDEKKDEKKEKSKKSKKSSKSKKSKKSKREKKDEEKKEDDKKEDDKKD 190
>AL034489-11|CAL49453.1| 340|Caenorhabditis elegans Hypothetical
protein ZK678.8 protein.
Length = 340
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 237 SCLVPYLLRTCYPRSCQIPNRFDCQNRSRVALCVSPGD 124
S ++PYLL Y SC +P R C +S + L P D
Sbjct: 34 SWVIPYLLFANYLESCLLPLRVLCYTQSDL-LSTEPRD 70
>AC024211-5|AAF36063.2| 1119|Caenorhabditis elegans Hypothetical
protein Y76B12C.2 protein.
Length = 1119
Score = 27.5 bits (58), Expect = 8.6
Identities = 26/68 (38%), Positives = 36/68 (52%)
Frame = +3
Query: 195 FLGNTSLEDKVPDKKPLVPEKANDVQKNVTKVTKAGSERPKASSKRNDSSNSETDSGEME 374
F G + L+ V D P+ EK+ QKNV K SE+ + DSS+SE + EME
Sbjct: 422 FAGRSLLDAAVLD--PVEFEKS---QKNVKK-----SEKNDEKNTAGDSSSSEDEWEEME 471
Query: 375 RERPDPLI 398
+P P+I
Sbjct: 472 HFQP-PII 478
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,773,746
Number of Sequences: 27780
Number of extensions: 279561
Number of successful extensions: 1275
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1273
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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