Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23e05
         (639 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           23   2.5  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           23   2.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   5.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   5.8  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   7.6  

>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +3

Query: 543 DFKLQPFVPEYVPAVGDIDAFLKVTTPACD 632
           +F+L+P+ PE+ P       +L+ + P C+
Sbjct: 59  NFQLKPYNPEHKPPGPKDLVYLEPSPPFCE 88


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +3

Query: 543 DFKLQPFVPEYVPAVGDIDAFLKVTTPACD 632
           +F+L+P+ PE+ P       +L+ + P C+
Sbjct: 60  NFQLKPYNPEHKPPGPKDLVYLEPSPPFCE 89


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +3

Query: 285 KVTKAGSERPKASSKRNDSSNSETDSGEMERERPDPL 395
           ++T++   R +     NDS++S+TD   ++ +R + L
Sbjct: 199 ELTESEQHRLQNRLYTNDSTSSKTDDDSIDFDRMNSL 235


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +3

Query: 285 KVTKAGSERPKASSKRNDSSNSETDSGEMERERPDPL 395
           ++T++   R +     NDS++S+TD   ++ +R + L
Sbjct: 237 ELTESEQHRLQNRLYTNDSTSSKTDDDSIDFDRMNSL 273


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +1

Query: 136 DTQRDTTSILTVK 174
           DTQRD   ILT K
Sbjct: 309 DTQRDNPQILTYK 321


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,098
Number of Sequences: 438
Number of extensions: 2908
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)