Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23e03
(365 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr... 30 0.44
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr... 30 0.44
AL032626-2|CAA21539.1| 571|Caenorhabditis elegans Hypothetical ... 29 1.3
U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum... 27 3.1
U50309-4|AAG24133.1| 267|Caenorhabditis elegans Hypothetical pr... 27 4.1
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 27 5.4
U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical pr... 27 5.4
U55856-7|AAA98025.1| 249|Caenorhabditis elegans Hypothetical pr... 26 7.2
AF025450-2|AAB70936.3| 350|Caenorhabditis elegans Hypothetical ... 26 7.2
Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical pr... 26 9.5
AF098504-5|AAC67410.3| 322|Caenorhabditis elegans Serpentine re... 26 9.5
>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 30.3 bits (65), Expect = 0.44
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 9/68 (13%)
Frame = +1
Query: 22 NICLK*NCRKYGHCLPSNDLITRFECLPNF---------PTGIFRCTTGETLGSGADKGC 174
N+C NC G C P++D + EC F P C G T + +
Sbjct: 345 NVCQNHNCVNAGKCKPTSDTEYKCECEAGFLGKFCEKTSPCQTNPCKNGGTCIAVENSAY 404
Query: 175 CYQCPEYF 198
C CPE+F
Sbjct: 405 C-DCPEHF 411
>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 30.3 bits (65), Expect = 0.44
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 9/68 (13%)
Frame = +1
Query: 22 NICLK*NCRKYGHCLPSNDLITRFECLPNF---------PTGIFRCTTGETLGSGADKGC 174
N+C NC G C P++D + EC F P C G T + +
Sbjct: 345 NVCQNHNCVNAGKCKPTSDTEYKCECEAGFLGKFCEKTSPCQTNPCKNGGTCIAVENSAY 404
Query: 175 CYQCPEYF 198
C CPE+F
Sbjct: 405 C-DCPEHF 411
>AL032626-2|CAA21539.1| 571|Caenorhabditis elegans Hypothetical
protein Y37D8A.2 protein.
Length = 571
Score = 28.7 bits (61), Expect = 1.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 98 HSNRVMRSFEGKQWPYFRQFYFKQILK 18
HS++ F WP + Q Y+KQI++
Sbjct: 369 HSDKTAHLFRETYWPGYNQPYYKQIIR 395
>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
homolog protein 1 protein.
Length = 1722
Score = 27.5 bits (58), Expect = 3.1
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 28 CLK*NCRKYGHCLPSNDLITRFECLPNFPTGIFRCTTGETLGSGAD 165
C + C GHC+ + CLP+F TGI+ + L +G+D
Sbjct: 286 CDREPCLNGGHCVDDGQNLFTCFCLPSF-TGIYCGEPVDCLVNGSD 330
>U50309-4|AAG24133.1| 267|Caenorhabditis elegans Hypothetical
protein F58G4.4 protein.
Length = 267
Score = 27.1 bits (57), Expect = 4.1
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
Frame = +1
Query: 88 RFECLPNF--PTGIFRCTTGE 144
RFECLP+F P + CT+GE
Sbjct: 128 RFECLPSFYGPKCQYYCTSGE 148
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 26.6 bits (56), Expect = 5.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 103 PNFPTGIFRCTTGETLGSGADKGCCYQCPE 192
PNF G + GET G GC + C E
Sbjct: 307 PNFRVGEVPHSCGETCGGARKFGCPHPCTE 336
>U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical
protein F21D12.3 protein.
Length = 496
Score = 26.6 bits (56), Expect = 5.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 344 LFIDLKLIFKTFPNGVVGGFQGFLPVLALGFRQ 246
L I+L +IF GV+G +QG L ++ F +
Sbjct: 426 LIINLIIIFGAILGGVLGSYQGVLKLIKAKFTE 458
>U55856-7|AAA98025.1| 249|Caenorhabditis elegans Hypothetical
protein F31E8.1 protein.
Length = 249
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 170 PLSAPLPRVSPVVHRNIPVGKL 105
P +P RV+P+ H +P GKL
Sbjct: 99 PAPSPPSRVTPIRHSPLPAGKL 120
>AF025450-2|AAB70936.3| 350|Caenorhabditis elegans Hypothetical
protein C41H7.5 protein.
Length = 350
Score = 26.2 bits (55), Expect = 7.2
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2
Query: 266 KREENLENHQPHHLE 310
K+EEN ENH+ +H+E
Sbjct: 217 KQEENHENHEEYHVE 231
>Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical
protein F01G10.5 protein.
Length = 824
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 199 RNIPDIDNSNLYQHHYQESHRWCTEIYQLEN*EDIRT 89
RN D DN+ +E HR TE EN + ++T
Sbjct: 403 RNKQDADNARAQLEEEREKHRLATEKLHQENIDYMKT 439
>AF098504-5|AAC67410.3| 322|Caenorhabditis elegans Serpentine
receptor, class t protein62 protein.
Length = 322
Score = 25.8 bits (54), Expect = 9.5
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 91 FECLPNFPTGIF 126
F+CLP+F TGIF
Sbjct: 68 FQCLPHFVTGIF 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,838,001
Number of Sequences: 27780
Number of extensions: 160045
Number of successful extensions: 445
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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