Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23e02
         (625 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   4.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.8  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   4.8  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   8.4  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 346 DSLVVPRHLLPNFEG*GDQPL 284
           D L  PR +LPNF+   D+P+
Sbjct: 90  DKLEKPRKVLPNFK--TDEPI 108


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 10   INVAETSFRKILCSECVFYVQILCDVVI 93
            +++   SF  I+C+  VFY+  +C   I
Sbjct: 993  LHLVYISFLGIICAADVFYICHVCYATI 1020


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 10  INVAETSFRKILCSECVFYVQILCDVVI 93
           +++   SF  I+C+  VFY+  +C   I
Sbjct: 274 LHLVYISFLGIICAADVFYICHVCYATI 301


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = -1

Query: 577 IPWVLSAGYCVPE 539
           + WV S  +C+P+
Sbjct: 162 LAWVASLAFCIPQ 174


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,886
Number of Sequences: 336
Number of extensions: 3206
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)