Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23d12
(625 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_02_0025 - 5710833-5711234,5711373-5711528,5714615-5715382 271 3e-73
12_02_0360 - 17966857-17966865,17966866-17966954,17967276-179673... 77 2e-14
01_02_0069 - 10813467-10813475,10813476-10813564,10813865-108139... 43 2e-04
07_03_0395 + 17644813-17644921,17644961-17645084,17645545-176462... 32 0.32
11_01_0214 - 1682731-1682744,1683597-1683640,1684284-1684372,168... 31 0.56
12_01_0215 - 1634141-1634144,1634467-1634510,1635639-1635668,163... 31 0.98
06_01_0619 - 4501296-4501561,4501664-4501784,4501915-4502253,450... 30 1.7
11_06_0364 - 22727978-22729149,22730475-22730727,22731628-227319... 29 4.0
11_06_0361 - 22711200-22712180,22712523-22712729,22715205-227159... 29 4.0
06_01_0629 - 4582045-4582140,4582218-4582480,4582584-4582704,458... 28 5.2
05_03_0317 - 12249228-12249275,12263876-12264518,12264954-122666... 28 5.2
02_05_1329 - 35724567-35725255,35725626-35725682,35727667-35729050 28 6.9
02_04_0131 - 20046033-20046505,20047140-20047233,20047343-200474... 28 6.9
01_06_1214 + 35470688-35471340,35471617-35471701,35471750-354719... 28 6.9
>05_02_0025 - 5710833-5711234,5711373-5711528,5714615-5715382
Length = 441
Score = 271 bits (665), Expect = 3e-73
Identities = 124/184 (67%), Positives = 147/184 (79%), Gaps = 1/184 (0%)
Frame = +2
Query: 77 VAIGFEGSANKLGIGIVK-DGEILANCRRTYITPPGEGFLPRETAEHHQQNIHEVLQEAL 253
+A+G E SANK+GIG+V GEIL+N R TY+TPPG GFLPRETA HH ++ +L+ AL
Sbjct: 76 LALGLESSANKIGIGVVSLSGEILSNPRHTYVTPPGHGFLPRETAHHHLAHLLPLLRAAL 135
Query: 254 DQSGLNPDEIDVVCYTKGPGMGAPLMVCAIVARTCAKLWKKPIYGVNHCIGHIEMGRLIT 433
++G+ P ++ VCYTKGPGMGAPL V A AR + LW KP+ GVNHC+ H+EMGR +T
Sbjct: 136 GEAGVTPADLACVCYTKGPGMGAPLQVAAAAARALSLLWGKPLVGVNHCVAHVEMGRAVT 195
Query: 434 KANNPTVLYVSGGNTQIIAYSRKRYRIFGETIDIAVGNCLDRFARVLKLSNAPSPGYNIE 613
A +P VLYVSGGNTQ+IAYS RYRIFGETIDIAVGNCLDRFARVL+LSN PSPGYNIE
Sbjct: 196 GAVDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIAVGNCLDRFARVLELSNDPSPGYNIE 255
Query: 614 QAAK 625
Q AK
Sbjct: 256 QLAK 259
>12_02_0360 -
17966857-17966865,17966866-17966954,17967276-17967399,
17967639-17967717,17968267-17968352,17968471-17968661,
17970496-17970560,17971192-17971282,17971705-17971801,
17971883-17972128,17972248-17972505
Length = 444
Score = 76.6 bits (180), Expect = 2e-14
Identities = 53/154 (34%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Frame = +2
Query: 185 GFLPRETAEHHQQNIHEVLQEALDQSGLNPDEIDVVCYTKGPGMGAPLMVCAIVARTCAK 364
G P+ E H I +V+Q+ALD + ++ +++ V T GPG+ L V AR AK
Sbjct: 152 GVAPKMAEEAHSLAIDQVVQKALDDANVSENDLSAVAVTVGPGLSLCLRVGVHKARKIAK 211
Query: 365 LWKKPIYGVNHCIGHIEMG-----RLITK-ANNP-TVLYVSGG-NTQIIAYSRKRYRIFG 520
++ PI GV+H H + RL+ K + P L +SGG N ++A+ +Y G
Sbjct: 212 SFRLPIVGVHHMEAHALVSSSIDVRLVNKDLDFPFLALLISGGHNLLVLAHGLGQYVQLG 271
Query: 521 ETIDIAVGNCLDRFARVLKLSNAPSPGYNIEQAA 622
TID A+G D+ AR L L G +EQ A
Sbjct: 272 TTIDDAIGEAYDKSARWLGLDMRKGGGPALEQLA 305
>01_02_0069 -
10813467-10813475,10813476-10813564,10813865-10813988,
10814227-10814305,10815298-10815388,10815808-10815904,
10816197-10816241,10816369-10816464
Length = 209
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +2
Query: 233 EVLQEALDQSGLNPDEIDVVCYTKGPGMGAPLMVCAIVARTCAKLWKKPIYGVNH 397
+V+Q+ALD + ++ ++ V T GPG+ L V AR AK + PI GV+H
Sbjct: 47 QVVQKALDNANVSESDLSAVAVTVGPGLSLCLRVGVHKARKIAKSFHLPIVGVHH 101
>07_03_0395 +
17644813-17644921,17644961-17645084,17645545-17646268,
17646971-17647219
Length = 401
Score = 32.3 bits (70), Expect = 0.32
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Frame = +2
Query: 23 MLRCLRL*IIELNRIKMVVAIGFEGSANK------LGIGIVKDGEILANCRRTYITPPGE 184
+L C+RL EL+ K ++ G A+K GIG D + CRR+ + E
Sbjct: 287 VLACVRLAHPELDLWK-ILDQGVASDAHKDVMEELEGIGQRLDEALKQECRRS--SRYAE 343
Query: 185 GFLPRETAEHHQQNIHEVLQEALDQSGLNPDEIDVVCYTKGP 310
G + +HH Q E L+E +S NP EID + P
Sbjct: 344 GHVLACIRDHHPQLHLEFLREGFSRSRRNPAEIDGLAKLMAP 385
>11_01_0214 -
1682731-1682744,1683597-1683640,1684284-1684372,
1684461-1684505,1685044-1685073,1685189-1685296,
1685380-1685465,1686180-1686267,1687494-1687694,
1687885-1687960,1688040-1688089,1688180-1688242,
1688322-1688398,1688893-1688953,1689377-1689417,
1690005-1690086
Length = 384
Score = 31.5 bits (68), Expect = 0.56
Identities = 11/38 (28%), Positives = 25/38 (65%)
Frame = -2
Query: 534 ISIVSPNILYLFLEYAIICVFPPLTYSTVGLFALVINL 421
+ I++ + + + L AI+C +PP+TY + ++V+N+
Sbjct: 265 LGIINTSRVAVILSMAILCSYPPMTYLSRPWLSIVVNI 302
>12_01_0215 -
1634141-1634144,1634467-1634510,1635639-1635668,
1635784-1635891,1635975-1636060,1636779-1636866,
1638135-1638253,1638525-1638600,1638820-1638882,
1639536-1639592,1640016-1640056,1640642-1640738,
1641636-1641692
Length = 289
Score = 30.7 bits (66), Expect = 0.98
Identities = 10/38 (26%), Positives = 25/38 (65%)
Frame = -2
Query: 534 ISIVSPNILYLFLEYAIICVFPPLTYSTVGLFALVINL 421
+ I++ + + + L A++C +PP+TY + ++V+N+
Sbjct: 218 LGIINTSRVAVILSMALLCSYPPMTYLSRPWLSIVVNI 255
>06_01_0619 -
4501296-4501561,4501664-4501784,4501915-4502253,
4502290-4502327,4502673-4502757,4502840-4503093,
4503868-4503961
Length = 398
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/69 (26%), Positives = 26/69 (37%)
Frame = +1
Query: 310 WYGGAIDGVCNCCQNMC*TMEKTYLRCKSLYWTYRNGKVDNQSK*SNSAICEWREYTNYS 489
W+G + CQ + T + L CK L W + N K + + W YT+
Sbjct: 302 WFGAEAVSPSSPCQFLPITPKLEILMCKVLMWVVETMHMKNLIKHRTAWVALWLIYTSMK 361
Query: 490 IFKKKIQDI 516
QDI
Sbjct: 362 FRIDSSQDI 370
>11_06_0364 -
22727978-22729149,22730475-22730727,22731628-22731963,
22732306-22732512,22734988-22735686,22736441-22736590,
22740204-22740962,22741023-22741235
Length = 1262
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 365 LWKKPIYGVNHCIGHIEMGRLITKANNP 448
L+ K +YG HC+ E+ ++ KAN P
Sbjct: 603 LFIKEVYGSAHCMSDTELRLMLGKANTP 630
>11_06_0361 -
22711200-22712180,22712523-22712729,22715205-22715903,
22717848-22717979,22720422-22721180,22721241-22721453
Length = 996
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 365 LWKKPIYGVNHCIGHIEMGRLITKANNP 448
L+ K +YG HC+ E+ ++ KAN P
Sbjct: 597 LFIKEVYGSAHCMSDTELRLMLGKANTP 624
>06_01_0629 -
4582045-4582140,4582218-4582480,4582584-4582704,
4582833-4583171,4583208-4583245,4583355-4583670,
4583753-4584006,4586417-4586546
Length = 518
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/61 (24%), Positives = 24/61 (39%)
Frame = +1
Query: 310 WYGGAIDGVCNCCQNMC*TMEKTYLRCKSLYWTYRNGKVDNQSK*SNSAICEWREYTNYS 489
W+G + CQ + T + L CK L W + N K + + W YT+
Sbjct: 391 WFGAEAVSPSSPCQFLPITPKLEILMCKVLMWVVETMHMKNLIKHRTAWVALWLIYTSMK 450
Query: 490 I 492
+
Sbjct: 451 L 451
>05_03_0317 -
12249228-12249275,12263876-12264518,12264954-12266682,
12283603-12283975,12284119-12284715
Length = 1129
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/83 (21%), Positives = 37/83 (44%)
Frame = +2
Query: 194 PRETAEHHQQNIHEVLQEALDQSGLNPDEIDVVCYTKGPGMGAPLMVCAIVARTCAKLWK 373
P ET E +Q +HE+L + + L+P + V+ K G + C + + ++
Sbjct: 395 PEETKEIQRQ-VHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIR-YR 452
Query: 374 KPIYGVNHCIGHIEMGRLITKAN 442
PI +N + + + +K +
Sbjct: 453 HPIPRLNDMLDELSGSIVFSKVD 475
>02_05_1329 - 35724567-35725255,35725626-35725682,35727667-35729050
Length = 709
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -3
Query: 509 CIFFLNML*FVYSLHSHI 456
C+FFL +L F++S HSH+
Sbjct: 8 CLFFLFLLFFMWSSHSHL 25
>02_04_0131 -
20046033-20046505,20047140-20047233,20047343-20047434,
20047560-20047611,20047721-20047878,20048190-20048280,
20048397-20049455
Length = 672
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 197 RETAEHHQQNIHEVLQEALDQSGLNPDEI 283
R + H Q H+VL E ++++G + DE+
Sbjct: 138 RRSTTSHDQGQHDVLSEIVEEAGTSSDEM 166
>01_06_1214 +
35470688-35471340,35471617-35471701,35471750-35471906,
35472086-35472189
Length = 332
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -2
Query: 174 GVMYVLLQLAKISPSLTIPIPSLFALPSNPIATTIFIRFNSIIYKRKQ-RSIISLTQIV 1
G M L++ + + I FAL +F+R N I+Y+ K+ R+ L Q++
Sbjct: 252 GHMLNLIEFQTVKVDMNIERDLAFALQVKECPQLLFLRGNKILYREKELRTADELVQMI 310
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,175,005
Number of Sequences: 37544
Number of extensions: 414152
Number of successful extensions: 935
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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