Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23d12
         (625 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024859-27|AAK29978.4|  337|Caenorhabditis elegans Hypothetical...   282   2e-76
Z81030-8|CAB02716.1|  421|Caenorhabditis elegans Hypothetical pr...    65   3e-11
U64846-9|AAG24117.3|  343|Caenorhabditis elegans Serpentine rece...    30   1.5  
U50191-4|AAK31553.1|  194|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AF025471-5|AAB71064.2|  334|Caenorhabditis elegans Serpentine re...    28   4.7  
Z81098-2|CAB03182.1|  961|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z75714-8|CAB00061.1|  471|Caenorhabditis elegans Hypothetical pr...    28   6.2  
U64846-10|AAW88397.1|  341|Caenorhabditis elegans Serpentine rec...    28   6.2  
Z81497-3|CAB04081.2|  593|Caenorhabditis elegans Hypothetical pr...    27   8.2  
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ...    27   8.2  

>AC024859-27|AAK29978.4|  337|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.1 protein.
          Length = 337

 Score =  282 bits (691), Expect = 2e-76
 Identities = 132/187 (70%), Positives = 155/187 (82%), Gaps = 2/187 (1%)
 Frame = +2

Query: 71  MVVAIGFEGSANKLGIGIVKDGEILANCRRTYITPPGEGFLPRETAEHHQQNIHEVLQEA 250
           MV  IG EGSANK+G+GI++DG +L+N R T+  PPGEGF P ETA+HH+Q I  ++ EA
Sbjct: 1   MVCVIGIEGSANKIGVGIIRDGVVLSNPRATFHAPPGEGFRPTETAQHHRQQIVRLVGEA 60

Query: 251 LDQSGL-NPD-EIDVVCYTKGPGMGAPLMVCAIVARTCAKLWKKPIYGVNHCIGHIEMGR 424
           +  + + NP+ EID + YTKGPGMGAPL V AIVART +  WKKPI  VNHC+GHIEMGR
Sbjct: 61  IKLANIQNPELEIDGIAYTKGPGMGAPLQVGAIVARTLSLTWKKPIIPVNHCVGHIEMGR 120

Query: 425 LITKANNPTVLYVSGGNTQIIAYSRKRYRIFGETIDIAVGNCLDRFARVLKLSNAPSPGY 604
           LIT A+NP VLYVSGGNTQ+I+Y++KRYRIFGETIDIAVGNCLDRFARVLKL NAPSPGY
Sbjct: 121 LITGADNPVVLYVSGGNTQVISYTKKRYRIFGETIDIAVGNCLDRFARVLKLPNAPSPGY 180

Query: 605 NIEQAAK 625
           NIEQ AK
Sbjct: 181 NIEQLAK 187


>Z81030-8|CAB02716.1|  421|Caenorhabditis elegans Hypothetical
           protein C01G10.10 protein.
          Length = 421

 Score = 65.3 bits (152), Expect = 3e-11
 Identities = 47/173 (27%), Positives = 87/173 (50%), Gaps = 6/173 (3%)
 Frame = +2

Query: 74  VVAIGFEGSANKLGIGIVKDG-EILANCRRTY--ITPPGEGFLPRETAEHHQQNIHEVLQ 244
           V  +G E S +   + IV +  EIL++ R T   I     G  P   A  H++N+  +++
Sbjct: 23  VKVLGIETSCDDTAVAIVNEKREILSSERYTERAIQRQQGGINPSVCALQHRENLPRLIE 82

Query: 245 EALDQSGLNPDEIDVVCYTKGPGMGAPLMVCAIVARTCAKLWKKPIYGVNHCIGHIEMGR 424
           + L+ +G +P ++D V  T  PG+   L      A   AK  + P+  V+H   H     
Sbjct: 83  KCLNDAGTSPKDLDAVAVTVTPGLVIALKEGISAAIGFAKKHRLPLIPVHHMRAHALSIL 142

Query: 425 LI-TKANNP-TVLYVSGGNTQI-IAYSRKRYRIFGETIDIAVGNCLDRFARVL 574
           L+      P + + +SGG+  I +A   ++++++G+++  + G C+D+ AR L
Sbjct: 143 LVDDSVRFPFSAVLLSGGHALISVAEDVEKFKLYGQSVSGSPGECIDKVARQL 195


>U64846-9|AAG24117.3|  343|Caenorhabditis elegans Serpentine
           receptor, class h protein193 protein.
          Length = 343

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -3

Query: 482 FVYSLHSHIALLDYLLWLSTFPFLYV 405
           ++++LHS I + DY L L T PFL +
Sbjct: 54  YLFALHSWIVVFDYSLSLLTVPFLLI 79


>U50191-4|AAK31553.1|  194|Caenorhabditis elegans Hypothetical
           protein T14B4.5 protein.
          Length = 194

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
 Frame = -1

Query: 262 RLVQSFLQYFMNVLLMMLRSFSRKKPFTGWGYVRSSA-IGQDFSIFNYTN-SQFVCTSLK 89
           R +QS L     V++++ + F++K   T W    +SA +G            Q + +SL 
Sbjct: 88  RTIQSVLIVLAVVMVLLAQGFTQKPGKTTWQLFNTSAVVGLICGFIRPVQMQQRLFSSLH 147

Query: 88  S--YCYYHFYSIQF 53
              YCY+ F+ I F
Sbjct: 148 EGFYCYFMFFIISF 161


>AF025471-5|AAB71064.2|  334|Caenorhabditis elegans Serpentine
           receptor, class h protein195 protein.
          Length = 334

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -3

Query: 482 FVYSLHSHIALLDYLLWLSTFPFLYV 405
           ++++LH+ I L DY L L T PF+ V
Sbjct: 52  YMFTLHTWILLFDYSLSLLTAPFVLV 77


>Z81098-2|CAB03182.1|  961|Caenorhabditis elegans Hypothetical
           protein K07A12.2 protein.
          Length = 961

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
 Frame = +2

Query: 419 GRLITK------ANNPTVLYVSGGNTQIIAYSRKRYRIFGETIDIAVGN 547
           G LITK      +NNP +  +S  N  I+  SR  +    + + + VGN
Sbjct: 302 GNLITKIETLAFSNNPNLQLISVQNNNIVQISRNSFESLDKLVVLLVGN 350


>Z75714-8|CAB00061.1|  471|Caenorhabditis elegans Hypothetical
           protein ZC434.7a protein.
          Length = 471

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 16/60 (26%), Positives = 30/60 (50%)
 Frame = +2

Query: 128 KDGEILANCRRTYITPPGEGFLPRETAEHHQQNIHEVLQEALDQSGLNPDEIDVVCYTKG 307
           K+G+IL      Y+    EGF+ +E  E  +Q +   ++E   ++G N   +D + +  G
Sbjct: 262 KEGKILKEKCDKYVESMKEGFVKKEEYEKIRQKVLRWMEERNIRNGENVVVVDALNFGYG 321


>U64846-10|AAW88397.1|  341|Caenorhabditis elegans Serpentine
           receptor, class h protein194, isoform b protein.
          Length = 341

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 482 FVYSLHSHIALLDYLLWLSTFPFLYV 405
           ++++LHS I + DY L L   PFL +
Sbjct: 54  YLFALHSWIVVFDYSLSLLAVPFLLI 79


>Z81497-3|CAB04081.2|  593|Caenorhabditis elegans Hypothetical
           protein F10C2.6 protein.
          Length = 593

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/38 (28%), Positives = 23/38 (60%)
 Frame = +2

Query: 242 QEALDQSGLNPDEIDVVCYTKGPGMGAPLMVCAIVART 355
           Q+ +DQ GL  +++ +VC+    G+   L VC + +++
Sbjct: 387 QKLIDQFGLIDEDVLIVCWGNSEGVYWTLEVCGLRSKS 424


>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
            protein W09B6.1a protein.
          Length = 2054

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +3

Query: 189  FFLEKLRSIINKTFMKYCKKLWTSLVSIQMKLT 287
            F  EK    +   F KYCKK     VSI +K+T
Sbjct: 1054 FSSEKFLDCLKTNFRKYCKKTDVINVSIFVKIT 1086


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,005,735
Number of Sequences: 27780
Number of extensions: 378270
Number of successful extensions: 1088
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1087
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)