Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23d12
         (625 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   2.4  
AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    23   2.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   3.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.4  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      21   9.8  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 571 NSSKPI*AVANSYINSFTKY 512
           N+ + + AV N Y N +TKY
Sbjct: 706 NAQQQVQAVRNYYANLYTKY 725


>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 77  VAIGFEGSANKLGIGIVKDGEI 142
           +A+GF G A    IGIV D  +
Sbjct: 98  LAVGFSGLAAGFAIGIVGDAGV 119


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 358 C*TMEKTYLRCKSLYWTYRNGKVDNQ 435
           C T+E+T  +C      Y NG+  +Q
Sbjct: 355 CNTLERTPSKCSQTSVHYSNGQTHSQ 380


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +2

Query: 194 PRETAEHHQQNIHEVLQEALDQSGLNP 274
           P + ++  +QN   V ++A+ Q+G  P
Sbjct: 482 PNDKSQVIKQNTWTVFRDAITQTGTGP 508


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 170 TPPGEGFLPRETAEHHQQNIHEVL-QEALDQSGLNPDE 280
           +PP    LP   + HH  + H+VL Q++      NPDE
Sbjct: 60  SPPEHRDLPIYQSHHHLHH-HQVLYQQSPYLMYENPDE 96


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,795
Number of Sequences: 438
Number of extensions: 5072
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)