Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23d11
(253 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0046 - 21834942-21835055,21835145-21835220,21835297-218355... 26 4.8
04_04_1328 - 32682087-32682200,32682290-32682365,32682442-326826... 26 4.8
04_03_0541 - 16934460-16934573,16934663-16934738,16934815-169350... 26 4.8
02_04_0664 + 24826714-24826842,24826912-24826947,24827551-248276... 26 4.8
01_06_1351 - 36510599-36510712,36510802-36510877,36510954-365112... 26 4.8
11_03_0073 - 9621199-9621312,9621401-9621476,9621553-9621619,962... 25 8.4
10_07_0181 - 13884007-13884767,13885263-13885329 25 8.4
>05_05_0046 -
21834942-21835055,21835145-21835220,21835297-21835553,
21835643-21835741,21835820-21836018,21836102-21836315,
21836470-21836538,21836626-21836950,21837065-21837235,
21837315-21837479,21837555-21838191,21838258-21838319,
21838581-21838652,21839256-21839291,21839361-21839489
Length = 874
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 169 KTAAALVSLCKLKCTAYFLIKAITNKKK 252
KTAA +VS C+ KC +IK ++KK
Sbjct: 92 KTAARVVSRCQPKCVVN-IIKEFDDRKK 118
>04_04_1328 -
32682087-32682200,32682290-32682365,32682442-32682698,
32682788-32682886,32682965-32683163,32683247-32683460,
32683615-32683683,32683772-32684096,32684211-32684381,
32684461-32684625,32684701-32684814,32685228-32685336,
32685403-32685464,32685726-32685797,32686401-32686436,
32686506-32686634
Length = 736
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 169 KTAAALVSLCKLKCTAYFLIKAITNKKK 252
KTAA +VS C+ KC +IK ++KK
Sbjct: 92 KTAARVVSRCQPKCVVN-IIKEFDDRKK 118
>04_03_0541 -
16934460-16934573,16934663-16934738,16934815-16935071,
16935161-16935259,16935338-16935536,16935620-16935833,
16935988-16936056,16936144-16936468,16936583-16936753,
16936833-16936997,16937073-16937709,16937776-16937837,
16938098-16938169,16938689-16938724,16938794-16938922
Length = 874
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 169 KTAAALVSLCKLKCTAYFLIKAITNKKK 252
KTAA +VS C+ KC +IK ++KK
Sbjct: 92 KTAARVVSRCQPKCVVN-IIKEFDDRKK 118
>02_04_0664 +
24826714-24826842,24826912-24826947,24827551-24827622,
24827882-24827943,24828010-24828646,24828722-24828886,
24828966-24829136,24829251-24829575,24829663-24829731,
24829886-24830099,24830183-24830381,24830460-24830558,
24830648-24830904,24830981-24831056,24831146-24831259
Length = 874
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 169 KTAAALVSLCKLKCTAYFLIKAITNKKK 252
KTAA +VS C+ KC +IK ++KK
Sbjct: 92 KTAARVVSRCQPKCVVN-IIKEFDDRKK 118
>01_06_1351 -
36510599-36510712,36510802-36510877,36510954-36511210,
36511300-36511398,36511477-36511675,36511759-36511972,
36512127-36512195,36512283-36512607,36512722-36512892,
36512972-36513136,36513212-36513848,36513915-36513976,
36514237-36514308,36514912-36514947,36515017-36515145
Length = 874
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 169 KTAAALVSLCKLKCTAYFLIKAITNKKK 252
KTAA +VS C+ KC +IK ++KK
Sbjct: 92 KTAARVVSRCQPKCVVN-IIKEFDDRKK 118
>11_03_0073 -
9621199-9621312,9621401-9621476,9621553-9621619,
9621655-9621751,9621898-9621996,9622348-9622358,
9622716-9622784,9622871-9623195,9623287-9623457,
9623538-9623713,9624173-9624414,9624481-9624542,
9625305-9625340,9626103-9626262,9626372-9626606,
9626694-9626949,9627062-9627176,9628388-9628450,
9628592-9629325
Length = 1035
Score = 25.0 bits (52), Expect = 8.4
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 166 QKTAAALVSLCKLKCTAYFLIKAITNKKK 252
QKTAA +VS C+ KC + K ++KK
Sbjct: 545 QKTAARVVSRCQPKCIVN-ITKDFDDRKK 572
>10_07_0181 - 13884007-13884767,13885263-13885329
Length = 275
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 151 CQTRSQKTAAALVSLCKLKCTAY 219
C Q TAAA V CK C A+
Sbjct: 184 CPPELQVTAAAAVVACKSACVAF 206
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,595,651
Number of Sequences: 37544
Number of extensions: 59017
Number of successful extensions: 78
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78
length of database: 14,793,348
effective HSP length: 62
effective length of database: 12,465,620
effective search space used: 261778020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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