Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23d11
         (253 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC199172-4|ABO33272.1|  304|Caenorhabditis elegans F-box a prote...    27   2.3  
U88175-6|AAB42283.1|  234|Caenorhabditis elegans Hypothetical pr...    25   5.4  
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.     25   5.4  
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso...    25   5.4  
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso...    25   5.4  
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso...    25   5.4  
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso...    25   5.4  
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.     25   5.4  
AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical ...    25   7.1  

>AC199172-4|ABO33272.1|  304|Caenorhabditis elegans F-box a protein
           protein 29 protein.
          Length = 304

 Score = 26.6 bits (56), Expect = 2.3
 Identities = 14/46 (30%), Positives = 28/46 (60%)
 Frame = +2

Query: 38  IFYYAFFFIKTIKSVLQNVIKLINKIVTKSY*NRDAVNVKQGHRKP 175
           +F++  F IKT K  +Q+VIK+ + ++ +    +  V+V++   KP
Sbjct: 210 LFHFEEFSIKTDKFPMQSVIKVRDDLLQRCTFKKCTVSVEKFSVKP 255


>U88175-6|AAB42283.1|  234|Caenorhabditis elegans Hypothetical
           protein F21F3.6 protein.
          Length = 234

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 44  YYAFFFIKTIKSVLQNVIKLINKIVTKSY*NRDAVN 151
           Y AF  I    ++ Q  + +IN + TKSY N +  N
Sbjct: 127 YIAFAAIALFLAIFQISLDIINFVDTKSYQNMNGEN 162


>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
          Length = 4250

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 151  INSIPILIGFRYNFIY*FNYILQNTLYCF 65
            +N  P++   R+     F YI  N LYC+
Sbjct: 1127 VNGQPLMKAHRFVLSQDFGYIALNILYCY 1155


>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
            actin-binding)homolog protein 1, isoform b protein.
          Length = 4203

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 151  INSIPILIGFRYNFIY*FNYILQNTLYCF 65
            +N  P++   R+     F YI  N LYC+
Sbjct: 1044 VNGQPLMKAHRFVLSQDFGYIALNILYCY 1072


>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
            actin-binding)homolog protein 1, isoform a protein.
          Length = 4488

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 151  INSIPILIGFRYNFIY*FNYILQNTLYCF 65
            +N  P++   R+     F YI  N LYC+
Sbjct: 1365 VNGQPLMKAHRFVLSQDFGYIALNILYCY 1393


>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
            actin-binding)homolog protein 1, isoform d protein.
          Length = 4369

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 151  INSIPILIGFRYNFIY*FNYILQNTLYCF 65
            +N  P++   R+     F YI  N LYC+
Sbjct: 1365 VNGQPLMKAHRFVLSQDFGYIALNILYCY 1393


>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
            actin-binding)homolog protein 1, isoform c protein.
          Length = 4447

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 151  INSIPILIGFRYNFIY*FNYILQNTLYCF 65
            +N  P++   R+     F YI  N LYC+
Sbjct: 1365 VNGQPLMKAHRFVLSQDFGYIALNILYCY 1393


>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
          Length = 4219

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 151  INSIPILIGFRYNFIY*FNYILQNTLYCF 65
            +N  P++   R+     F YI  N LYC+
Sbjct: 1060 VNGQPLMKAHRFVLSQDFGYIALNILYCY 1088


>AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical
           protein ZC132.5 protein.
          Length = 1277

 Score = 25.0 bits (52), Expect = 7.1
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 187 LRPLRFSVTLFDINSIPILIG 125
           LR LRF+  LF +N  P L+G
Sbjct: 303 LRVLRFTRVLFGLNVSPFLLG 323


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,428,624
Number of Sequences: 27780
Number of extensions: 66287
Number of successful extensions: 147
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 12,740,198
effective HSP length: 63
effective length of database: 10,990,058
effective search space used: 219801160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)