Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23d11
         (253 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   1.8  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   1.8  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    19   9.6  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    19   9.6  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    19   9.6  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    19   9.6  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 1.8
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = -1

Query: 136 ILIGFRYNFIY*FNYILQ--NTLYCFYKKESVIKYKA*VNYSY 14
           IL+  R +    F  IL   NT+Y    K+ V++  A   YSY
Sbjct: 251 ILLTVRPHLELTFENILSHINTVYVLRTKKGVMRVDASEEYSY 293


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 1.8
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = -1

Query: 136 ILIGFRYNFIY*FNYILQ--NTLYCFYKKESVIKYKA*VNYSY 14
           IL+  R +    F  IL   NT+Y    K+ V++  A   YSY
Sbjct: 251 ILLTVRPHLELTFENILSHINTVYVLRTKKGVMRVDASEEYSY 293


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 232 LLLENMQYILIYID*LRPLRFSVTLFDINSI 140
           LLL ++ Y+ IY+   R LR       IN++
Sbjct: 209 LLLMSLVYLEIYLATRRRLRERARQSRINAV 239


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 232 LLLENMQYILIYID*LRPLRFSVTLFDINSI 140
           LLL ++ Y+ IY+   R LR       IN++
Sbjct: 209 LLLMSLVYLEIYLATRRRLRERARQSRINAV 239


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 232 LLLENMQYILIYID*LRPLRFSVTLFDINSI 140
           LLL ++ Y+ IY+   R LR       IN++
Sbjct: 209 LLLMSLVYLEIYLATRRRLRERARQSRINAV 239


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 126 DFVTILFINLITF 88
           D V+ILF +++TF
Sbjct: 421 DSVSILFSDVVTF 433


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,939
Number of Sequences: 438
Number of extensions: 819
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4527252
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)