Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23d10
         (685 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83221-8|CAI79139.1|  469|Caenorhabditis elegans Hypothetical pr...    34   0.082
Z83221-7|CAB05707.2|  503|Caenorhabditis elegans Hypothetical pr...    34   0.082
U58748-5|AAP31419.1|  285|Caenorhabditis elegans Hypothetical pr...    28   7.1  
U58748-4|AAB52967.1|  522|Caenorhabditis elegans Hypothetical pr...    28   7.1  
U46753-12|AAM98047.2|  539|Caenorhabditis elegans Dishevelled re...    28   7.1  
U46753-10|AAM98049.1|  623|Caenorhabditis elegans Dishevelled re...    28   7.1  

>Z83221-8|CAI79139.1|  469|Caenorhabditis elegans Hypothetical
           protein C49A1.4b protein.
          Length = 469

 Score = 34.3 bits (75), Expect = 0.082
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -3

Query: 413 KLMSRKGLRCADVCIVSSDALQALKMAN-QRWSTEKNLDLIKEY 285
           K+ SR G +C+ +CI S D   + K  N   W    N DL K Y
Sbjct: 416 KIQSRFGKKCSFICITSGDTANSAKRLNIPVWPLNSNTDLDKLY 459


>Z83221-7|CAB05707.2|  503|Caenorhabditis elegans Hypothetical
           protein C49A1.4a protein.
          Length = 503

 Score = 34.3 bits (75), Expect = 0.082
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -3

Query: 413 KLMSRKGLRCADVCIVSSDALQALKMAN-QRWSTEKNLDLIKEY 285
           K+ SR G +C+ +CI S D   + K  N   W    N DL K Y
Sbjct: 450 KIQSRFGKKCSFICITSGDTANSAKRLNIPVWPLNSNTDLDKLY 493


>U58748-5|AAP31419.1|  285|Caenorhabditis elegans Hypothetical
           protein ZK180.3b protein.
          Length = 285

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 242 IFTHSKIVFVTLRIFIC*FRDYLHCTYLNA 153
           IFTH K +FVT  I +    +Y+ C Y+N+
Sbjct: 240 IFTHGKFLFVTSIIHL--IINYVLCVYMNS 267


>U58748-4|AAB52967.1|  522|Caenorhabditis elegans Hypothetical
           protein ZK180.3a protein.
          Length = 522

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 242 IFTHSKIVFVTLRIFIC*FRDYLHCTYLNA 153
           IFTH K +FVT  I +    +Y+ C Y+N+
Sbjct: 388 IFTHGKFLFVTSIIHL--IINYVLCVYMNS 415


>U46753-12|AAM98047.2|  539|Caenorhabditis elegans Dishevelled
           related protein 1,isoform a protein.
          Length = 539

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = -2

Query: 342 ENGKPTMEYRKKFRSY*GISATRTETPTVKKQNYLHSFQNSFCNSQD 202
           ENGK   ++  K  S    S T   T  VK+Q +LH+    +C+  D
Sbjct: 35  ENGKED-DFDNKSVSSAQYSQTSEATTAVKQQPFLHTMTKVYCHIDD 80


>U46753-10|AAM98049.1|  623|Caenorhabditis elegans Dishevelled
           related protein 1,isoform c protein.
          Length = 623

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = -2

Query: 342 ENGKPTMEYRKKFRSY*GISATRTETPTVKKQNYLHSFQNSFCNSQD 202
           ENGK   ++  K  S    S T   T  VK+Q +LH+    +C+  D
Sbjct: 35  ENGKED-DFDNKSVSSAQYSQTSEATTAVKQQPFLHTMTKVYCHIDD 80


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,965,560
Number of Sequences: 27780
Number of extensions: 268435
Number of successful extensions: 509
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)