Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23d06
         (617 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4EBX4 Cluster: Putative uncharacterized protein; n=8; ...    38   0.25 
UniRef50_A6LVE6 Cluster: Putative uncharacterized protein; n=1; ...    33   4.1  
UniRef50_A7EFY5 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  
UniRef50_UPI00006CB76E Cluster: Response regulator receiver doma...    32   9.5  
UniRef50_Q7Z998 Cluster: Endochitinase; n=1; Trichoderma atrovir...    32   9.5  

>UniRef50_Q4EBX4 Cluster: Putative uncharacterized protein; n=8;
           Wolbachia|Rep: Putative uncharacterized protein -
           Wolbachia endosymbiont of Drosophila ananassae
          Length = 721

 Score = 37.5 bits (83), Expect = 0.25
 Identities = 14/41 (34%), Positives = 29/41 (70%)
 Frame = +1

Query: 466 NTSKMSEKDQKELVKKRASLKGRLTTFRKYIEELSARKAQR 588
           N SK+ EKD+K ++K  + +KG+ ++  + +E++S ++ QR
Sbjct: 18  NDSKLKEKDEKSILKLASKIKGKKSSIAEELEKISKKEKQR 58


>UniRef50_A6LVE6 Cluster: Putative uncharacterized protein; n=1;
           Clostridium beijerinckii NCIMB 8052|Rep: Putative
           uncharacterized protein - Clostridium beijerinckii NCIMB
           8052
          Length = 362

 Score = 33.5 bits (73), Expect = 4.1
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = +1

Query: 457 FCPNTSKMSEKDQKELVKKRASLKGRLTTFRKYIEELSARKAQREKISNRFI 612
           F  NT K     + +  K R + K  L + +K  EEL A+K + EK  N F+
Sbjct: 22  FTKNTIKFKNLIKYKFKKSRKAEKLTLESAKKQFEELKAKKEELEKYENEFL 73


>UniRef50_A7EFY5 Cluster: Putative uncharacterized protein; n=1;
           Sclerotinia sclerotiorum 1980|Rep: Putative
           uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 845

 Score = 32.7 bits (71), Expect = 7.2
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +1

Query: 490 DQKELVKKRASLKGRLTTFRKYIEELSARKAQREKISNRFI 612
           D + +  +R ++K  +T F+KY+      ++  EKI N FI
Sbjct: 286 DSRPVASERGTMKKIITIFKKYVRSALTAESSSEKIKNPFI 326


>UniRef50_UPI00006CB76E Cluster: Response regulator receiver domain
           containing protein; n=1; Tetrahymena thermophila
           SB210|Rep: Response regulator receiver domain containing
           protein - Tetrahymena thermophila SB210
          Length = 1765

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -3

Query: 273 NHIVNPACNMININNLNKKQSNGLHITN 190
           N +VN +CN  NINN N+   N L + N
Sbjct: 334 NEVVNSSCNNNNINNNNENNHNNLDLEN 361


>UniRef50_Q7Z998 Cluster: Endochitinase; n=1; Trichoderma
           atroviride|Rep: Endochitinase - Trichoderma atroviride
           (Hypocrea atroviridis)
          Length = 321

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 241 YHITSWVNYVVCLMCFCWHFFGNSLSFTLV 330
           +H  +W++ V  LM FC+ F G  L F+ V
Sbjct: 17  FHNMAWLSVVAALMSFCYSFIGLGLGFSKV 46


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 506,664,751
Number of Sequences: 1657284
Number of extensions: 8848191
Number of successful extensions: 21437
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21405
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)