Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23d05
         (591 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            29   0.15 
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    26   0.79 
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    24   3.2  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    24   3.2  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   4.2  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   7.4  
AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    23   7.4  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   9.8  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   9.8  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 28.7 bits (61), Expect = 0.15
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -3

Query: 475 CIHWLALCKDKGHRRRGLDQSWTLLHVRCRHGS 377
           C  W  LC +K  ++R L   W L+H   ++G+
Sbjct: 554 CASW-PLCGEKSAKKRKLPSRWYLVHEESKYGA 585


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 26.2 bits (55), Expect = 0.79
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +3

Query: 102 CRCMLTSTPFG 134
           CRCM +STPFG
Sbjct: 342 CRCMKSSTPFG 352


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 68  KLRRCECNYVCLSLHADKHSVRITLSAYRSSQITQKASRNL 190
           K R C+C   CL+  A++  V    +A R +Q TQ   R L
Sbjct: 61  KYRACQCEKCCLT--AERQRVMALQTALRRAQ-TQDEQRAL 98


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 68  KLRRCECNYVCLSLHADKHSVRITLSAYRSSQITQKASRNL 190
           K R C+C   CL+  A++  V    +A R +Q TQ   R L
Sbjct: 61  KYRACQCEKCCLT--AERQRVMALQTALRRAQ-TQDEQRAL 98


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
            protein.
          Length = 1087

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 80   CECNYVCLSLHADKHSVRITLSAYRSSQITQ 172
            CEC+  CL++  D  S    L  Y    +T+
Sbjct: 909  CECDAFCLAVSQDGRSYSPQLFEYAEQVLTR 939


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -2

Query: 398 CPLPSRLSQHDS*HFPVHTSRRMEAELC 315
           C L  ++  H   H+ VH   R E  LC
Sbjct: 502 CKLCGKVVTHIRNHYHVHFPGRFECPLC 529


>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 146 AYRSSQITQKASRNLFISFHLSAGSTRLDH 235
           AYRS+  + +  R +F SF     + RLD+
Sbjct: 147 AYRSTLASGRIERAVFYSFMEMGDNVRLDN 176


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +2

Query: 74  RRCECNYVCLSLHADKHSVRITLSAYRSSQITQKASRNL 190
           RRC+ +    S++ D HS+  + + +R  +   K  RNL
Sbjct: 428 RRCQRSR---SIYFDTHSLYCSYNRFRYRRYLSKIQRNL 463


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 486  TACSVYTG*HSARTRGTGAGDWTRAGPCF 400
            +ACS + G HS+    TGAG  +  G  F
Sbjct: 1254 SACSNHYGDHSSGKDPTGAGSSSGKGGGF 1282


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,383
Number of Sequences: 2352
Number of extensions: 14272
Number of successful extensions: 33
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)