BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23d05
(591 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT015311-1|AAT94539.1| 1320|Drosophila melanogaster AT04056p pro... 29 6.2
BT001901-1|AAN71690.1| 1252|Drosophila melanogaster SD21833p pro... 29 6.2
AY051839-1|AAK93263.1| 961|Drosophila melanogaster LD34385p pro... 29 6.2
AE014296-595|AAN11542.2| 1320|Drosophila melanogaster CG17569-PB... 29 6.2
AE014296-594|AAF47736.3| 1338|Drosophila melanogaster CG17569-PA... 29 6.2
>BT015311-1|AAT94539.1| 1320|Drosophila melanogaster AT04056p protein.
Length = 1320
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = -3
Query: 493 PLDGMFCIHW-LALCKDKGHRR---RGLDQSWTLLHVRC 389
P+ G+FCI W A CK++ + RGLD + L++ C
Sbjct: 1162 PIFGVFCIRWRRANCKEENESKFVIRGLDIAEPPLNIYC 1200
>BT001901-1|AAN71690.1| 1252|Drosophila melanogaster SD21833p protein.
Length = 1252
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = -3
Query: 493 PLDGMFCIHW-LALCKDKGHRR---RGLDQSWTLLHVRC 389
P+ G+FCI W A CK++ + RGLD + L++ C
Sbjct: 1094 PIFGVFCIRWRRANCKEENESKFVIRGLDIAEPPLNIYC 1132
>AY051839-1|AAK93263.1| 961|Drosophila melanogaster LD34385p
protein.
Length = 961
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = -3
Query: 493 PLDGMFCIHW-LALCKDKGHRR---RGLDQSWTLLHVRC 389
P+ G+FCI W A CK++ + RGLD + L++ C
Sbjct: 803 PIFGVFCIRWRRANCKEENESKFVIRGLDIAEPPLNIYC 841
>AE014296-595|AAN11542.2| 1320|Drosophila melanogaster CG17569-PB,
isoform B protein.
Length = 1320
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = -3
Query: 493 PLDGMFCIHW-LALCKDKGHRR---RGLDQSWTLLHVRC 389
P+ G+FCI W A CK++ + RGLD + L++ C
Sbjct: 1162 PIFGVFCIRWRRANCKEENESKFVIRGLDIAEPPLNIYC 1200
>AE014296-594|AAF47736.3| 1338|Drosophila melanogaster CG17569-PA,
isoform A protein.
Length = 1338
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = -3
Query: 493 PLDGMFCIHW-LALCKDKGHRR---RGLDQSWTLLHVRC 389
P+ G+FCI W A CK++ + RGLD + L++ C
Sbjct: 1180 PIFGVFCIRWRRANCKEENESKFVIRGLDIAEPPLNIYC 1218
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,128,460
Number of Sequences: 53049
Number of extensions: 580670
Number of successful extensions: 1433
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1433
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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