Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23d04
         (625 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D17389-2|BAA41470.1| 5126|Drosophila melanogaster ryanodine rece...    30   2.2  
D17389-1|BAA41469.1| 5126|Drosophila melanogaster ryanodine rece...    30   2.2  
AE013599-722|AAM71083.1| 5127|Drosophila melanogaster CG10844-PC...    30   2.2  
AE013599-720|AAF59036.2| 5127|Drosophila melanogaster CG10844-PA...    30   2.2  
AE014297-2733|AAF55719.1|  490|Drosophila melanogaster CG4770-PA...    28   8.9  

>D17389-2|BAA41470.1| 5126|Drosophila melanogaster ryanodine receptor
            homologue protein.
          Length = 5126

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
 Frame = -3

Query: 383  TALVASRVVLYHQRFPVQRILRSDG*VSFRAQLERITITSPLIIYTSSPSKST-----VS 219
            T L A    LY     +Q  LRS    S R QL    IT P+I  +S PS S+     + 
Sbjct: 1837 TPLGAELKELYSDE-EMQHSLRSLVTESVRPQLRMTEITPPVIATSSMPSVSSEPIPDID 1895

Query: 218  LNLPPEF-MEVIRQYFLSA 165
                P+F +EV+RQ+ + A
Sbjct: 1896 QLYSPKFPLEVVRQFVMEA 1914


>D17389-1|BAA41469.1| 5126|Drosophila melanogaster ryanodine receptor
            homologue protein.
          Length = 5126

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
 Frame = -3

Query: 383  TALVASRVVLYHQRFPVQRILRSDG*VSFRAQLERITITSPLIIYTSSPSKST-----VS 219
            T L A    LY     +Q  LRS    S R QL    IT P+I  +S PS S+     + 
Sbjct: 1837 TPLGAELKELYSDE-EMQHSLRSLVTESVRPQLRMTEITPPVIATSSMPSVSSEPIPDID 1895

Query: 218  LNLPPEF-MEVIRQYFLSA 165
                P+F +EV+RQ+ + A
Sbjct: 1896 QLYSPKFPLEVVRQFVMEA 1914


>AE013599-722|AAM71083.1| 5127|Drosophila melanogaster CG10844-PC,
            isoform C protein.
          Length = 5127

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
 Frame = -3

Query: 383  TALVASRVVLYHQRFPVQRILRSDG*VSFRAQLERITITSPLIIYTSSPSKST-----VS 219
            T L A    LY     +Q  LRS    S R QL    IT P+I  +S PS S+     + 
Sbjct: 1838 TPLGAELKELYSDE-EMQHSLRSLVTESVRPQLRMTEITPPVIATSSMPSVSSEPIPDID 1896

Query: 218  LNLPPEF-MEVIRQYFLSA 165
                P+F +EV+RQ+ + A
Sbjct: 1897 QLYSPKFPLEVVRQFVMEA 1915


>AE013599-720|AAF59036.2| 5127|Drosophila melanogaster CG10844-PA,
            isoform A protein.
          Length = 5127

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
 Frame = -3

Query: 383  TALVASRVVLYHQRFPVQRILRSDG*VSFRAQLERITITSPLIIYTSSPSKST-----VS 219
            T L A    LY     +Q  LRS    S R QL    IT P+I  +S PS S+     + 
Sbjct: 1838 TPLGAELKELYSDE-EMQHSLRSLVTESVRPQLRMTEITPPVIATSSMPSVSSEPIPDID 1896

Query: 218  LNLPPEF-MEVIRQYFLSA 165
                P+F +EV+RQ+ + A
Sbjct: 1897 QLYSPKFPLEVVRQFVMEA 1915


>AE014297-2733|AAF55719.1|  490|Drosophila melanogaster CG4770-PA
           protein.
          Length = 490

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -1

Query: 550 LLLSRVTLDRVV-VIVM*CWKGQT*CVSRCRAISPCSRPFYCTHLGDLPLQFNLVVP 383
           L+   + +D VV  ++M   K +   +S C A S  + P    HLG+L ++++ + P
Sbjct: 281 LICDIIPVDFVVNAMIMMVGKAKLGSLSICNATSGVTNPITWQHLGELTMKWSRIYP 337


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,720,570
Number of Sequences: 53049
Number of extensions: 521516
Number of successful extensions: 1421
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1417
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)