Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23c24
         (550 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    23   2.0  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    23   2.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.7  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    22   4.7  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              21   6.2  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   8.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   8.2  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   8.2  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    21   8.2  

>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 27  YAFIKNINGNFQNSNMNPFSKQYK 98
           Y+   N N N+ N+  N ++  YK
Sbjct: 91  YSNYNNYNNNYNNNYNNNYNNNYK 114


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 27  YAFIKNINGNFQNSNMNPFSKQYK 98
           Y+   N N N+ N+  N ++  YK
Sbjct: 91  YSNYNNYNNNYNNNYNNNYNNNYK 114


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +2

Query: 455 NAQYSYYYDFGSKAHSAKGNTNTYYSNESAKK 550
           NA    + +  ++ +S  G+T TYYS  + ++
Sbjct: 363 NAVIRNFNESENRRNSCLGSTETYYSKHNTQQ 394



 Score = 21.8 bits (44), Expect = 4.7
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 222 VEIVPTKKSKMHSFS*VKNIIQTRIKMQKHKR 317
           VE+ P K SK   +  ++NI+      Q +K+
Sbjct: 440 VELQPVKSSKSSGWRKLRNIVHWTPFFQTYKK 471


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 48  NGNFQNSNMNPFSKQY 95
           N N+ N+N N + K Y
Sbjct: 93  NNNYNNNNYNNYKKLY 108


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 538 LITIICVCISFRTM 497
           +I+ ICVC+S  T+
Sbjct: 6   IISAICVCVSAMTL 19


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 227 NCSDKEIKNAFIQLSK 274
           N +DKE  N F+QL K
Sbjct: 70  NYNDKEAVNEFMQLLK 85


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 227 NCSDKEIKNAFIQLSK 274
           N +DKE  N F+QL K
Sbjct: 70  NYNDKEAVNEFMQLLK 85


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +2

Query: 443 NLRKNAQYSYYYDFGSKAHSAKGNTNTYYSN 535
           +L  N +YS Y ++ +  ++     N Y +N
Sbjct: 317 SLSNNYKYSNYNNYNNNYNNYNNYNNNYNNN 347


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
          protein-1 protein.
          Length = 128

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 77 IHVTILEISIYIFDKC 30
          I + +L   +++FDKC
Sbjct: 7  IRIAVLLAIVFLFDKC 22


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,854
Number of Sequences: 438
Number of extensions: 3595
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)