Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23c22
         (577 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    30   0.062
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    28   0.19 
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    25   1.3  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 29.9 bits (64), Expect = 0.062
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +1

Query: 343 SIYMKAISIYCSAN*FRTNLYKLKILKNI 429
           SIY    S+YCS N FR   Y  KI +N+
Sbjct: 435 SIYFDTHSLYCSYNRFRYRRYLSKIQRNL 463


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 28.3 bits (60), Expect = 0.19
 Identities = 14/63 (22%), Positives = 30/63 (47%)
 Frame = -1

Query: 199 HSYHHMSPRHSQSRNRYRQLLQNVPPDEVVYGSPLSRSRYRRNEHSQNESQCADRRRQAV 20
           H +HH  P HSQ ++        +PP+ +   +  + +R  R   ++ E    D+   ++
Sbjct: 185 HHHHHHHPHHSQQQHSASPRCYPMPPEHMY--NMFNFNRNGREARNRAEKNRRDKLNGSI 242

Query: 19  RQL 11
           ++L
Sbjct: 243 QEL 245


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = -1

Query: 148 RQLLQNVPPDEVVYGSPLSRSRYRRNEHSQNESQCADRRRQAVR 17
           +Q  Q  P  + V G+   + R ++ +H Q  +    +RR+ +R
Sbjct: 75  QQQQQRQPQRQAVVGTQQQQQRRQQQQHQQRSNATQAQRREQLR 118


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 462,394
Number of Sequences: 2352
Number of extensions: 7642
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)