Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23c20
         (517 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    24   0.81 
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    23   2.5  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   2.5  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   4.3  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   5.7  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           21   5.7  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   5.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   5.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   5.7  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    21   7.5  
EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor 1-a...    21   7.5  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    21   7.5  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    21   7.5  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   10.0 

>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 24.2 bits (50), Expect = 0.81
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 247 IIGIFAYFATIIYHGMYIPLQNI 315
           +I IFA  ATI     Y+PL N+
Sbjct: 4   VIFIFALLATICAAFAYVPLPNV 26


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 424 VTFAVKALLSYTGK 465
           VT A KA L+YTG+
Sbjct: 123 VTLATKATLNYTGR 136


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -2

Query: 411 QREPSNYIVLFDTTQQD*FFDLVNVFRKYQ 322
           ++EP  Y+++ D    D F  +VN F   Q
Sbjct: 463 EKEP--YVIILDDEHDDAFIGIVNQFHILQ 490


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = +3

Query: 414 LIGRNFRGKSFAFVHGQVWLKY 479
           ++ ++ RG+ F ++H Q+  +Y
Sbjct: 224 IVNKDRRGELFYYMHQQIMARY 245


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 190 VRVVIHNINCFTKYFKKYYIIGIFAYFATIIYH 288
           +R V  NI  F    K+  +IG+ A  A++ YH
Sbjct: 186 LRWVSENIEWFGGNPKRITLIGLSAGGASVHYH 218


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 190 VRVVIHNINCFTKYFKKYYIIGIFAYFATIIYH 288
           +R V  NI  F    K+  +IG+ A  A++ YH
Sbjct: 57  LRWVSENIEWFGGNPKRITLIGLSAGGASVHYH 89


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = +2

Query: 155 SCCWVC 172
           +CCWVC
Sbjct: 465 TCCWVC 470


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = +2

Query: 155 SCCWVC 172
           +CCWVC
Sbjct: 555 TCCWVC 560


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 190 VRVVIHNINCFTKYFKKYYIIGIFAYFATIIYH 288
           +R V  NI  F    K+  +IG+ A  A++ YH
Sbjct: 186 LRWVSENIEWFGGNPKRITLIGLSAGGASVHYH 218


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 144 EQNATKNDAAGVHSLLSFILG 82
           E   +KN     H+LL+F LG
Sbjct: 124 EAGISKNGQTREHALLAFTLG 144


>EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor
           1-alpha protein.
          Length = 172

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 144 EQNATKNDAAGVHSLLSFILG 82
           E   +KN     H+LL+F LG
Sbjct: 51  EAGISKNGQTREHALLAFTLG 71


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 144 EQNATKNDAAGVHSLLSFILG 82
           E   +KN     H+LL+F LG
Sbjct: 67  EAGISKNGQTREHALLAFTLG 87


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 144 EQNATKNDAAGVHSLLSFILG 82
           E   +KN     H+LL+F LG
Sbjct: 124 EAGISKNGQTREHALLAFTLG 144


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +3

Query: 357 TNLAESCRKELYNCWVLSVLIGRNFRGKS 443
           T++  SCR++ YN    + L+       S
Sbjct: 95  TSVTPSCRRQRYNIAAANPLLAEKLAAPS 123


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,048
Number of Sequences: 438
Number of extensions: 2913
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)