Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23c18
         (602 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003178-1|AAO24933.1|  476|Drosophila melanogaster RH09265p pro...    29   6.4  
AY058534-1|AAL13763.1|  497|Drosophila melanogaster LD23951p pro...    29   6.4  
AE014297-2712|AAF55702.2|  497|Drosophila melanogaster CG4662-PA...    29   6.4  
AE014297-2711|AAN13811.1|  479|Drosophila melanogaster CG4662-PB...    29   6.4  

>BT003178-1|AAO24933.1|  476|Drosophila melanogaster RH09265p
           protein.
          Length = 476

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 15/67 (22%), Positives = 30/67 (44%)
 Frame = +2

Query: 242 LKAAVGDFVSKVYQTTHDAVTVITTESAKQIEKFRKSKSDDCTIIKESKPAETSSGFKFF 421
           +K A  ++  ++Y T  D +  +  +  +   K R+  SD+    KE+ PA      + F
Sbjct: 105 IKFASVEYDDQLYMTPQDFLDSVVEQEPRPRLKRRQLSSDEVDKYKENTPALKKGSTRLF 164

Query: 422 KKAETEG 442
           +    +G
Sbjct: 165 RNLRDKG 171


>AY058534-1|AAL13763.1|  497|Drosophila melanogaster LD23951p
           protein.
          Length = 497

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 15/67 (22%), Positives = 30/67 (44%)
 Frame = +2

Query: 242 LKAAVGDFVSKVYQTTHDAVTVITTESAKQIEKFRKSKSDDCTIIKESKPAETSSGFKFF 421
           +K A  ++  ++Y T  D +  +  +  +   K R+  SD+    KE+ PA      + F
Sbjct: 105 IKFASVEYDDQLYMTPQDFLDSVVEQEPRPRLKRRQLSSDEVDKYKENTPALKKGSTRLF 164

Query: 422 KKAETEG 442
           +    +G
Sbjct: 165 RNLRDKG 171


>AE014297-2712|AAF55702.2|  497|Drosophila melanogaster CG4662-PA,
           isoform A protein.
          Length = 497

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 15/67 (22%), Positives = 30/67 (44%)
 Frame = +2

Query: 242 LKAAVGDFVSKVYQTTHDAVTVITTESAKQIEKFRKSKSDDCTIIKESKPAETSSGFKFF 421
           +K A  ++  ++Y T  D +  +  +  +   K R+  SD+    KE+ PA      + F
Sbjct: 105 IKFASVEYDDQLYMTPQDFLDSVVEQEPRPRLKRRQLSSDEVDKYKENTPALKKGSTRLF 164

Query: 422 KKAETEG 442
           +    +G
Sbjct: 165 RNLRDKG 171


>AE014297-2711|AAN13811.1|  479|Drosophila melanogaster CG4662-PB,
           isoform B protein.
          Length = 479

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 15/67 (22%), Positives = 30/67 (44%)
 Frame = +2

Query: 242 LKAAVGDFVSKVYQTTHDAVTVITTESAKQIEKFRKSKSDDCTIIKESKPAETSSGFKFF 421
           +K A  ++  ++Y T  D +  +  +  +   K R+  SD+    KE+ PA      + F
Sbjct: 105 IKFASVEYDDQLYMTPQDFLDSVVEQEPRPRLKRRQLSSDEVDKYKENTPALKKGSTRLF 164

Query: 422 KKAETEG 442
           +    +G
Sbjct: 165 RNLRDKG 171


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,148,681
Number of Sequences: 53049
Number of extensions: 311352
Number of successful extensions: 1216
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1215
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)