Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23c18
(602 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 5.3
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 5.3
DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein. 22 5.3
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 22 5.3
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 7.0
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 7.0
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 7.0
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 7.0
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 7.0
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 7.0
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 7.0
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 7.0
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 7.0
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 9.3
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 9.3
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -3
Query: 363 SSDFDFLNFSICLALSVVMTVTASC 289
S++F ++ S + S+ +T+TASC
Sbjct: 114 SNEFIRIHHSGSITRSIRLTITASC 138
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -3
Query: 363 SSDFDFLNFSICLALSVVMTVTASC 289
S++F ++ S + S+ +T+TASC
Sbjct: 114 SNEFIRIHHSGSITRSIRLTITASC 138
>DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein.
Length = 132
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 50 KSAENITKLVKSSVTRLLGTKECPKQSSECKQ 145
K E TKL V RL+ + +S+ CK+
Sbjct: 83 KFRERTTKLDSEQVNRLVNNCKDITESNSCKK 114
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -3
Query: 363 SSDFDFLNFSICLALSVVMTVTASC 289
S++F ++ S + S+ +T+TASC
Sbjct: 53 SNEFIRIHHSGSITRSIRLTITASC 77
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 311 TTESAKQIEKFRKSKSDD 364
TT + E+FR+S+S+D
Sbjct: 5 TTNHSHHDERFRQSRSED 22
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 311 TTESAKQIEKFRKSKSDD 364
TT + E+FR+S+S+D
Sbjct: 5 TTNHSHHDERFRQSRSED 22
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 311 TTESAKQIEKFRKSKSDD 364
TT + E+FR+S+S+D
Sbjct: 5 TTNHSHHDERFRQSRSED 22
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 311 TTESAKQIEKFRKSKSDD 364
TT + E+FR+S+S+D
Sbjct: 5 TTNHSHHDERFRQSRSED 22
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 311 TTESAKQIEKFRKSKSDD 364
TT + E+FR+S+S+D
Sbjct: 5 TTNHSHHDERFRQSRSED 22
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 311 TTESAKQIEKFRKSKSDD 364
TT + E+FR+S+S+D
Sbjct: 5 TTNHSHHDERFRQSRSED 22
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 311 TTESAKQIEKFRKSKSDD 364
TT + E+FR+S+S+D
Sbjct: 5 TTNHSHHDERFRQSRSED 22
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 311 TTESAKQIEKFRKSKSDD 364
TT + E+FR+S+S+D
Sbjct: 5 TTNHSHHDERFRQSRSED 22
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 171 TTLAAIITNVTTGRSTPS 224
T + ++TNVTT +TP+
Sbjct: 826 TEQSVVVTNVTTTINTPT 843
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.0 bits (42), Expect = 9.3
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -3
Query: 336 SICLALSVVMTVTASCV 286
++C+A+S+ TVT C+
Sbjct: 739 TLCVAISLSATVTLVCL 755
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.0 bits (42), Expect = 9.3
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -3
Query: 336 SICLALSVVMTVTASCV 286
++C+A+S+ TVT C+
Sbjct: 829 TLCVAISLSATVTLVCL 845
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,999
Number of Sequences: 438
Number of extensions: 1720
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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