Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23c15
(691 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908 55 6e-08
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 47 1e-05
10_08_0999 + 22121029-22121235,22121819-22122082,22122123-221223... 44 1e-04
11_01_0724 + 5981680-5981748,5982301-5982397,5982496-5982593,598... 37 0.013
01_01_1205 - 9693702-9694517,9694591-9695076,9697014-9697095,969... 36 0.023
07_01_0579 + 4299104-4299652,4300845-4300935,4301018-4301211,430... 34 0.093
11_01_0296 - 2222329-2222481,2222777-2222836,2222965-2223064,222... 32 0.37
12_01_0297 - 2244793-2244945,2245337-2245396,2245529-2245628,224... 32 0.49
07_03_0539 - 19237573-19239169,19239258-19239410,19239505-192395... 29 4.6
03_02_0400 - 8135283-8135490,8136047-8136213,8136289-8136477,813... 29 4.6
04_04_1657 - 35102751-35102868,35102987-35103504,35104065-351042... 28 6.1
10_02_0094 - 5228472-5228703,5229040-5229133,5230627-5230675,523... 28 8.0
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 28 8.0
01_01_0354 + 2804640-2804703,2804911-2806451 28 8.0
>04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908
Length = 511
Score = 54.8 bits (126), Expect = 6e-08
Identities = 38/131 (29%), Positives = 70/131 (53%), Gaps = 1/131 (0%)
Frame = +3
Query: 198 QTGLMCDIGLDNREPATIQRLIASGMTVARLNMQNLEPEACAQLIQSIRQAVYNYSLELD 377
+T L+C +G +R +++L+ +GM VAR N + E + + ++RQA++N +
Sbjct: 22 KTKLVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYHQETLDNLRQAMHNTGV--- 78
Query: 378 FVYPLAVVVDVKGPDIVTGGLKNGPHATVELLQTETIRLTIDPSWRDCGTSECLYVGYDQ 557
AV++D KGP+I TG LK+G ++L T+ LT+ + G + + Y +
Sbjct: 79 ---LCAVMLDTKGPEIRTGFLKDG--KPIKL--TKGQELTVTTDYEIKGDENMITMSYKK 131
Query: 558 L-TDLNTDDII 587
L D+ ++I
Sbjct: 132 LPVDVKPGNVI 142
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 47.2 bits (107), Expect = 1e-05
Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 20/191 (10%)
Frame = +3
Query: 171 VHENPCEELQTGLMCDIGLDNREPATIQRLIASGMTVARLNMQNLEPEACAQLIQSIRQA 350
V P +T ++C IG I +L +GM VARLNM + + + ++I +++
Sbjct: 106 VWSKPNVRRKTKIVCTIGPSTNTKEMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKE- 164
Query: 351 VYNYSLELDFVYPLAVVVDVKG---PDIV-----------TGGL----KNGPHATVELLQ 476
YN + D V +A+++D K D++ +GG+ ++G +L+
Sbjct: 165 -YNAQTK-DNV--IAIMLDTKSYTEYDVLMLECFFAVYASSGGIGPEVRSGDLPQPIMLE 220
Query: 477 T-ETIRLTIDPSWRDCGTSECLYVGYDQ-LTDLNTDDIIYIDSLSPGKIKLVVTEVGDDS 650
T + TI R GT C+ V YD + D+ D++ +D G + L+V +DS
Sbjct: 221 TGQEFTFTIK---RGVGTETCVSVNYDDFVNDVEVGDMLLVDG---GMMSLLVKSKTEDS 274
Query: 651 LECLIVIGGTI 683
++C ++ GG +
Sbjct: 275 VKCEVIDGGEL 285
>10_08_0999 +
22121029-22121235,22121819-22122082,22122123-22122324,
22122456-22122590,22122668-22122778,22122871-22122959,
22123237-22123299,22123461-22123636,22123785-22123887,
22124286-22124461,22124625-22124733,22124851-22124943,
22126294-22126435,22126655-22126671
Length = 628
Score = 44.0 bits (99), Expect = 1e-04
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 13/175 (7%)
Frame = +3
Query: 198 QTGLMCDIGLDNREPATIQRLIASGMTVARLNMQNLEPEACAQLIQSIRQAVYNYSLELD 377
+T ++C IG I +L +GM VAR+NM + + ++ ++I +++ Y+ +
Sbjct: 90 KTKIVCTIGPSTNTREMIWKLAETGMNVARMNMSHGDHQSHQKVIDLVKE----YNAKNT 145
Query: 378 FVYPLAVVVDVK------------GPDIVTGGLKNGPHATVELLQTETIRLTIDPSWRDC 521
+A+++D K GP++ +G + + L + + TI R
Sbjct: 146 DGNVIAIMLDTKQMSCDDRTSVMQGPEVRSGDVPE----PIMLEEGQEFNFTIK---RGV 198
Query: 522 GTSECLYVGYDQ-LTDLNTDDIIYIDSLSPGKIKLVVTEVGDDSLECLIVIGGTI 683
T + + V YD + D+ DI+ +D G + L V D+++C +V GG +
Sbjct: 199 STKDTVSVNYDDFINDVEVGDILLVDG---GMMSLAVKSKTADTVKCEVVDGGEL 250
>11_01_0724 +
5981680-5981748,5982301-5982397,5982496-5982593,
5983535-5983690,5983986-5984063,5984135-5984266,
5984856-5984936,5985442-5985510,5985597-5985686,
5986001-5986145,5986218-5986276,5986384-5986479,
5986561-5986628,5986704-5986803,5986910-5986966,
5987179-5987337
Length = 517
Score = 37.1 bits (82), Expect = 0.013
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 6/167 (3%)
Frame = +3
Query: 201 TGLMCDIGLDNREPATIQRLIASGMTVARLNMQNLEPEACAQLIQSIRQAVYNYSLELDF 380
T ++ +G ++ IQ + +GM VAR + ++ + + ++R+A N ++
Sbjct: 30 TKIVGTLGPNSHSVEVIQECLTAGMAVARFDFSWMDASYHQETLNNLRKAAQN----VNK 85
Query: 381 VYPLAVVVDVKGPDIVTGGLKNGPHATVELLQTETIRLTIDPSWRDCGTSECLYVGYDQL 560
+ P V++D GP+I GP +EL +TI P +SE L + + L
Sbjct: 86 LCP--VMLDTLGPEIQVHNSTGGP---IELKAGN--HVTITPDLSKAPSSEILPIKFGGL 138
Query: 561 TD-LNTDDIIYIDS-LSPGKIK----LVVTEVGDDSLECLIVIGGTI 683
+ D ++I L G L V E +++ECL+ T+
Sbjct: 139 AKAVKKGDTLFIGQYLFTGSETTSSWLEVVETSGENVECLVTNTATL 185
>01_01_1205 -
9693702-9694517,9694591-9695076,9697014-9697095,
9697876-9698051,9698326-9698580
Length = 604
Score = 36.3 bits (80), Expect = 0.023
Identities = 24/81 (29%), Positives = 41/81 (50%)
Frame = +3
Query: 198 QTGLMCDIGLDNREPATIQRLIASGMTVARLNMQNLEPEACAQLIQSIRQAVYNYSLELD 377
+T ++C +G +R I RL+ +GM VAR N + E + + ++R A+ + +
Sbjct: 20 KTKIVCTLGPASRSVEMIGRLLRAGMCVARFNFSHGSHEYHQETLDNLRAAMESTGI--- 76
Query: 378 FVYPLAVVVDVKGPDIVTGGL 440
AV++D K D V G L
Sbjct: 77 ---LCAVMLDTKARDFVLGVL 94
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +3
Query: 372 LDFVYPLAVVVDVKGPDIVTGGLKNGPHATVELLQTETIRLTIDPSWRDCGTSECLYVGY 551
L+ + P+ ++ ++GP+I TG LK+G V+L + + I ++ D S + G + + Y
Sbjct: 166 LNGIKPILDLLKIQGPEIRTGFLKDG--KPVQLKKGQEITVSTDYSIK--GDDNMISMSY 221
Query: 552 DQL-TDLNTDDII 587
+L DL +I
Sbjct: 222 KKLAVDLKPGSVI 234
>07_01_0579 +
4299104-4299652,4300845-4300935,4301018-4301211,
4301501-4301622,4302378-4302856,4303033-4303334
Length = 578
Score = 34.3 bits (75), Expect = 0.093
Identities = 25/90 (27%), Positives = 45/90 (50%)
Frame = +3
Query: 198 QTGLMCDIGLDNREPATIQRLIASGMTVARLNMQNLEPEACAQLIQSIRQAVYNYSLELD 377
+T L+C +G ++ L GM VAR+NM + + E +I+++R+ L +
Sbjct: 100 RTKLVCTVGPATCGADELEALAVGGMNVARVNMCHGDREWHRGVIRAVRR------LNEE 153
Query: 378 FVYPLAVVVDVKGPDIVTGGLKNGPHATVE 467
+ +AV++D +G +I G L A E
Sbjct: 154 KGFAVAVMMDTEGSEIHMGDLGGAAAAKAE 183
>11_01_0296 -
2222329-2222481,2222777-2222836,2222965-2223064,
2223152-2223219,2223369-2223464,2223603-2223691,
2223762-2223906,2224100-2224189,2224271-2224342,
2224543-2224623,2224766-2224897,2225026-2225103,
2225280-2225435,2225521-2225618,2225712-2225793
Length = 499
Score = 32.3 bits (70), Expect = 0.37
Identities = 41/167 (24%), Positives = 77/167 (46%), Gaps = 6/167 (3%)
Frame = +3
Query: 201 TGLMCDIGLDNREPATIQRLIASGMTVARLNMQNLEPEACAQLIQSIRQAVYNYSLELDF 380
T ++ +G +R TI + +GM+VAR + + E + +++++ A+ + + +L
Sbjct: 2 TKIVGTLGPKSRAVDTISSCLKAGMSVARFDFSWGDAEYHQETLENLKLAIKS-TKKL-- 58
Query: 381 VYPLAVVVDVKGPDIVTGGLKNGPHATVELLQTETIRLTIDPSWRDCGTSECLYVGYDQL 560
AV++D GP++ + N A + L T+ LT D +SE L + + L
Sbjct: 59 ---CAVMLDTVGPEL---QVVNKSEAAISLEANGTVVLTPDQGQE--ASSELLPINFSGL 110
Query: 561 TD-LNTDDIIYIDS-LSPG----KIKLVVTEVGDDSLECLIVIGGTI 683
L I++ L G + L V+EV D + C+I T+
Sbjct: 111 AKALKPGATIFVGQYLFTGSETTSVWLEVSEVKGDDVVCVIKNSATL 157
>12_01_0297 -
2244793-2244945,2245337-2245396,2245529-2245628,
2245712-2245779,2245922-2246017,2246156-2246244,
2246320-2246464,2246643-2246732,2246816-2246887,
2247052-2247132,2247361-2247492,2247613-2247690,
2247930-2248085,2248227-2248324,2248418-2248499
Length = 499
Score = 31.9 bits (69), Expect = 0.49
Identities = 37/161 (22%), Positives = 78/161 (48%), Gaps = 6/161 (3%)
Frame = +3
Query: 201 TGLMCDIGLDNREPATIQRLIASGMTVARLNMQNLEPEACAQLIQSIRQAVYNYSLELDF 380
T ++ +G +R TI + +GM+VAR + + E + +++++ A+ + + +L
Sbjct: 2 TKIVGTLGPKSRSVDTISSCLKAGMSVARFDFSWGDAEYHQETLENLKVAIKS-TKKL-- 58
Query: 381 VYPLAVVVDVKGPDIVTGGLKNGPHATVELLQTETIRLTIDPSWRDCGTSECLYVGYDQL 560
AV++D GP++ + N A++ L + T+ LT D +S+ L + + L
Sbjct: 59 ---CAVMLDTVGPEL---QVVNKSEASISLEENGTVILTPDQGQE--ASSQVLPINFAGL 110
Query: 561 TD-LNTDDIIYIDS-LSPG----KIKLVVTEVGDDSLECLI 665
+ D I++ L G + L V+++ D + C+I
Sbjct: 111 AKAVKPGDTIFVGQYLFTGSETTSVWLEVSQIKGDDVVCVI 151
>07_03_0539 - 19237573-19239169,19239258-19239410,19239505-19239566,
19239855-19240103,19240248-19240337,19240453-19240632,
19240713-19240942,19241558-19241735,19242327-19242432,
19242786-19242883,19243683-19243813,19243908-19244087,
19244179-19244443,19244557-19244627,19244707-19244922,
19245147-19245294
Length = 1317
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 522 GTSECLYVGYDQLTDLNTDDIIYIDSLSPGKIKLVVTEVGDDSLE 656
GT +C+ T L D I Y+ GK+K+ +G D+L+
Sbjct: 890 GTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQ 934
>03_02_0400 -
8135283-8135490,8136047-8136213,8136289-8136477,
8136560-8136655,8136746-8136874,8136947-8137123,
8137256-8137366,8138592-8138792,8139022-8139186,
8139293-8139527,8139618-8139745,8139833-8139928,
8140017-8140112,8140252-8140325,8140393-8140462,
8140556-8140665,8140753-8140906,8141040-8141155,
8141259-8141379,8141464-8141641,8142331-8142489,
8142619-8142732,8142821-8143000,8143098-8143177
Length = 1117
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 8 IKKHIFLNLIIKIDSSFYSYYVTTLAYSIRGCTLF*RKTQCGTTNIAQTLL 160
IK ++ NL ++D ++ TT+AYS G LF CGT+ ++ L
Sbjct: 527 IKAWLYDNLGSRVDYDAPGHWCTTMAYSADGSRLF----SCGTSKDGESHL 573
>04_04_1657 -
35102751-35102868,35102987-35103504,35104065-35104211,
35104289-35106262,35106964-35107089,35107178-35107264,
35107335-35107424,35107725-35107811,35108248-35108300,
35109339-35109387
Length = 1082
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 484 VSVCKSSTVACGPFFSPPVTISGPL 410
+S+C T+ACG F + +T +G L
Sbjct: 335 LSICNVETIACGEFHTCAITATGDL 359
>10_02_0094 -
5228472-5228703,5229040-5229133,5230627-5230675,
5231229-5231321,5231404-5231635,5232416-5232506,
5232693-5232784,5232862-5232970,5233331-5233430,
5233614-5233754,5233846-5234010,5234088-5234279,
5234409-5234537,5234619-5234734,5234821-5234965,
5235039-5235102,5235241-5235463,5235584-5236244,
5236909-5237250
Length = 1089
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/61 (29%), Positives = 24/61 (39%)
Frame = -1
Query: 319 HASGSKFCIFNRATVIPEAISLCIVAGXXXXXXXXXXXPVCSSSQGFSCTLMLQ*CLSNV 140
HAS C RA +PEA+ C + VC++SQ F L + L
Sbjct: 433 HASFLNACKKQRA--VPEAVRFCKLINNPKMSTFNMLLSVCANSQDFDGALQVMVLLKEA 490
Query: 139 G 137
G
Sbjct: 491 G 491
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 27.9 bits (59), Expect = 8.0
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Frame = +3
Query: 78 PWHIPLEAAPCFKEKLNAVQPTLLKHYCNINVHEN---PCEELQTGLMCDIGLDNREP-- 242
PW +P +LNA + + +H C + H PC + MC G +RE
Sbjct: 186 PWILPHSCGDVCGRRLNADRDSGCEHNCLLLCHPGPCPPCPAIVPNAMCFCG-SHRETRR 244
Query: 243 ATIQRLIASGMTVARL 290
+ QR SG RL
Sbjct: 245 CSHQRYSCSGKCNKRL 260
>01_01_0354 + 2804640-2804703,2804911-2806451
Length = 534
Score = 27.9 bits (59), Expect = 8.0
Identities = 24/93 (25%), Positives = 38/93 (40%)
Frame = +3
Query: 129 AVQPTLLKHYCNINVHENPCEELQTGLMCDIGLDNREPATIQRLIASGMTVARLNMQNLE 308
A TL+KH+C IN E E L + + +N + I + V L MQ +E
Sbjct: 358 ATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYSYILKTTEKPKDVISL-MQRME 416
Query: 309 PEACAQLIQSIRQAVYNYSLELDFVYPLAVVVD 407
C +L + N + D+ + +V D
Sbjct: 417 KSGC-RLDSDTYNLILNLYVSWDYEKGVQLVWD 448
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,780,554
Number of Sequences: 37544
Number of extensions: 283683
Number of successful extensions: 782
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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