Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23c10
(584 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81077-7|CAB03070.2| 116|Caenorhabditis elegans Hypothetical pr... 106 1e-23
Z66521-10|CAH10788.1| 359|Caenorhabditis elegans Hypothetical p... 27 7.4
Z66521-9|CAA91402.1| 367|Caenorhabditis elegans Hypothetical pr... 27 7.4
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z75540-1|CAA99847.2| 1227|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z68161-6|CAA92295.2| 782|Caenorhabditis elegans Hypothetical pr... 27 9.8
AF149286-1|AAF99085.1| 782|Caenorhabditis elegans KRP95 protein. 27 9.8
AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical ... 27 9.8
AC024775-1|AAK68455.1| 456|Caenorhabditis elegans Hypothetical ... 27 9.8
AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like ... 27 9.8
>Z81077-7|CAB03070.2| 116|Caenorhabditis elegans Hypothetical
protein F36A2.8 protein.
Length = 116
Score = 106 bits (255), Expect = 1e-23
Identities = 54/118 (45%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Frame = +1
Query: 175 LHKVPKVDIDKSGVFKYILLKVYDQEVDGVEPSTIVLRGYKRCNYHSDIYDEVQGKLIPF 354
L + VDID GVFKYIL++V D + + V+RGY RC++H DI E + P
Sbjct: 3 LADIADVDIDPKGVFKYILIQVTD---NSTKQQKFVVRGYYRCSFHDDILQETKSSA-PS 58
Query: 355 DCEPW--GGGRISHDPDNKKIHIYGYSQAYGKADHEEAAKLIKNAYPDYTITISDEGY 522
D + GGGRI HD K I +YGYS YG+ADH+ A ++K YPDY I S++GY
Sbjct: 59 DLKLKCVGGGRIKHDEIGKDILVYGYSYGYGRADHQIAVDILKQKYPDYNIHFSNDGY 116
>Z66521-10|CAH10788.1| 359|Caenorhabditis elegans Hypothetical
protein W02B12.12b protein.
Length = 359
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 355 QRGLIYLVPHHIYQSDSCIS 296
QR Y++PH ++ S SCIS
Sbjct: 304 QRNRQYVIPHSVFLSTSCIS 323
>Z66521-9|CAA91402.1| 367|Caenorhabditis elegans Hypothetical
protein W02B12.12a protein.
Length = 367
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 355 QRGLIYLVPHHIYQSDSCIS 296
QR Y++PH ++ S SCIS
Sbjct: 304 QRNRQYVIPHSVFLSTSCIS 323
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 241 YDQEVDGVEPSTIVLRGYKRCNYHSDIYDEVQGKLIPFDC 360
YD +DG+ ST+ R Y +C+ G+LIP +C
Sbjct: 377 YDCSIDGLFSSTLCSRNYHKCS---------NGQLIPHEC 407
>Z75540-1|CAA99847.2| 1227|Caenorhabditis elegans Hypothetical
protein F37D6.1 protein.
Length = 1227
Score = 27.1 bits (57), Expect = 9.8
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +1
Query: 301 CNYHSDIYDEVQGKLIPFDCEPWGGGRISHDPDNKKIHIYGYS 429
C+ ++ D+++ K+ P GG++ DPD + I+G+S
Sbjct: 646 CSVDQEVSDDLKEKI------PLNGGKLMDDPDYAEFVIFGHS 682
>Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical
protein F20C5.2b protein.
Length = 1130
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 400 CLDHEIFYHHPKAHNQRGLIYLVPHHIYQSD 308
C+DH IF H +HNQ L+ IYQ +
Sbjct: 125 CIDH-IFEHMAASHNQEYLVRASYLEIYQEE 154
>Z68161-6|CAA92295.2| 782|Caenorhabditis elegans Hypothetical
protein F20C5.2a protein.
Length = 782
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 400 CLDHEIFYHHPKAHNQRGLIYLVPHHIYQSD 308
C+DH IF H +HNQ L+ IYQ +
Sbjct: 125 CIDH-IFEHMAASHNQEYLVRASYLEIYQEE 154
>AF149286-1|AAF99085.1| 782|Caenorhabditis elegans KRP95 protein.
Length = 782
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 400 CLDHEIFYHHPKAHNQRGLIYLVPHHIYQSD 308
C+DH IF H +HNQ L+ IYQ +
Sbjct: 125 CIDH-IFEHMAASHNQEYLVRASYLEIYQEE 154
>AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical
protein R10F2.6 protein.
Length = 1150
Score = 27.1 bits (57), Expect = 9.8
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = +1
Query: 367 WGGGRISHD-PDN----KKIHIYGYSQAYGKADHEEAAKLIKNAYPDYTITI 507
W R+S D PD+ H++ + + + K H+ KLI + P Y +T+
Sbjct: 702 WARVRMSSDQPDDCDFYDACHVFPWQEVFEKVAHKYKNKLICASSPMYNVTV 753
>AC024775-1|AAK68455.1| 456|Caenorhabditis elegans Hypothetical
protein Y41D4A.5 protein.
Length = 456
Score = 27.1 bits (57), Expect = 9.8
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 424 IHRCVSSYCLDHEIFYHHPK 365
+HRC++SYC H PK
Sbjct: 347 VHRCIASYCRRHLGIIEEPK 366
>AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like
protein (klp-11) protein.
Length = 607
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 400 CLDHEIFYHHPKAHNQRGLIYLVPHHIYQSD 308
C+DH IF H +HNQ L+ IYQ +
Sbjct: 88 CIDH-IFEHMAASHNQEYLVRASYLEIYQEE 117
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,630,655
Number of Sequences: 27780
Number of extensions: 333381
Number of successful extensions: 712
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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