Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23c06
(663 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0094 - 5583932-5584036,5584137-5584200,5584305-5584387,558... 180 1e-45
03_06_0061 + 31352703-31353037,31353145-31353274,31353708-313539... 165 2e-41
07_01_0105 - 798883-798942,799118-799186,799282-799345,799434-79... 152 3e-37
03_06_0052 - 31295839-31295883,31296312-31296380,31296458-312965... 100 1e-21
08_02_0881 - 22216657-22216780,22216918-22217056,22217120-222171... 32 0.35
12_01_0639 + 5383967-5385951,5386973-5387066,5387410-5387841,538... 31 1.1
11_02_0032 + 7564153-7564719,7564844-7565128,7565207-7565524,756... 30 1.4
10_08_0365 + 17224777-17224852,17224949-17224989,17225175-172252... 29 2.5
01_05_0406 + 21875376-21875451,21875570-21875610,21876245-218763... 29 2.5
04_04_0503 - 25701050-25701343,25701431-25701528,25701629-257016... 29 3.3
01_01_0752 - 5808798-5810183 28 5.8
01_01_0691 - 5328169-5328228,5328300-5328488,5328611-5328768,532... 28 5.8
10_08_0741 + 20235463-20235497,20237624-20237753,20238748-202389... 28 7.6
10_01_0322 + 3516922-3517899 28 7.6
08_01_0090 - 649631-651162,653189-655019,655313-655365,655731-65... 28 7.6
04_01_0105 + 1098551-1100392 28 7.6
01_05_0438 + 22142646-22143659,22144319-22144858 28 7.6
>03_02_0094 -
5583932-5584036,5584137-5584200,5584305-5584387,
5584523-5584588,5584711-5584801,5585259-5585392,
5586219-5586413,5586886-5587015,5587873-5587958
Length = 317
Score = 180 bits (437), Expect = 1e-45
Identities = 82/138 (59%), Positives = 101/138 (73%)
Frame = +3
Query: 249 SRARVYADVNSQRPREYWDYESYVVDWGNQEDYQLVRKLGRGKYSEVFEAINITNNEXXX 428
S ARVYADVN RPREYWDYE+ V+WG Q+DY++VRK+GRGKYSEVFE IN+TN+E
Sbjct: 2 STARVYADVNVHRPREYWDYEALAVEWGEQDDYEVVRKVGRGKYSEVFEGINVTNDERCI 61
Query: 429 XXXXXXXXXXXXXXXXXXLENLRGGTNIISLQAVVKDPVSRTPALIFEHVNNTDFKQLYS 608
L+NL GG NI+ L +V+D S+TP+LIFE+VN+TDFK LY
Sbjct: 62 IKILKPVKKKKIKREIKILQNLCGGPNIVKLHNIVRDQQSKTPSLIFEYVNSTDFKVLYP 121
Query: 609 TLSDYDIRYYLYELLKAL 662
TL+DYDIR+Y+YELLKAL
Sbjct: 122 TLTDYDIRFYIYELLKAL 139
>03_06_0061 +
31352703-31353037,31353145-31353274,31353708-31353902,
31354696-31354725,31355238-31355395,31355756-31355846,
31355924-31355989,31356331-31356413,31356495-31356558,
31356641-31356709,31356798-31356833
Length = 418
Score = 165 bits (402), Expect = 2e-41
Identities = 78/138 (56%), Positives = 94/138 (68%)
Frame = +3
Query: 249 SRARVYADVNSQRPREYWDYESYVVDWGNQEDYQLVRKLGRGKYSEVFEAINITNNEXXX 428
S ARVYAD NSQRP+EYWDYES ++WG Q+ Y+++RKLGRGKYSEVFE +E
Sbjct: 85 SVARVYADANSQRPKEYWDYESLDIEWGEQDGYEVLRKLGRGKYSEVFEGFRPGGDERCV 144
Query: 429 XXXXXXXXXXXXXXXXXXLENLRGGTNIISLQAVVKDPVSRTPALIFEHVNNTDFKQLYS 608
L+NL GG NI+ L VV+D S+TP+LIFE+VNNTDFK LY
Sbjct: 145 IKILKPVKKKKIKREIKILQNLYGGPNIVKLLDVVRDDESKTPSLIFEYVNNTDFKVLYP 204
Query: 609 TLSDYDIRYYLYELLKAL 662
TL DYDIRYY+YELLK +
Sbjct: 205 TLLDYDIRYYIYELLKVI 222
>07_01_0105 -
798883-798942,799118-799186,799282-799345,799434-799516,
799957-800022,800143-800233,800622-800779,801144-801338,
801499-801628,803016-803168,803877-803962
Length = 384
Score = 152 bits (368), Expect = 3e-37
Identities = 69/121 (57%), Positives = 85/121 (70%)
Frame = +3
Query: 300 WDYESYVVDWGNQEDYQLVRKLGRGKYSEVFEAINITNNEXXXXXXXXXXXXXXXXXXXX 479
WDYE+ + WG Q+DY++VRK+GRGKYSEVFE IN+ NNE
Sbjct: 70 WDYEALTIRWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIK 129
Query: 480 XLENLRGGTNIISLQAVVKDPVSRTPALIFEHVNNTDFKQLYSTLSDYDIRYYLYELLKA 659
L+NL GG NI+ L +V+D S+TP+LIFE+VNNTDFK LY TL+DYDIRYY+YELLKA
Sbjct: 130 ILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKA 189
Query: 660 L 662
L
Sbjct: 190 L 190
Score = 51.6 bits (118), Expect = 5e-07
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +3
Query: 249 SRARVYADVNSQRPREYWDYESYVVDWGNQE 341
S+ARVY DVN RP+EYWDYE+ V WG Q+
Sbjct: 2 SKARVYTDVNVLRPKEYWDYEALTVQWGVQQ 32
>03_06_0052 -
31295839-31295883,31296312-31296380,31296458-31296521,
31296598-31296680,31297243-31297308,31297426-31297516,
31298090-31298247,31298432-31298476,31299189-31299318,
31300685-31300935
Length = 333
Score = 100 bits (239), Expect = 1e-21
Identities = 41/57 (71%), Positives = 49/57 (85%)
Frame = +3
Query: 249 SRARVYADVNSQRPREYWDYESYVVDWGNQEDYQLVRKLGRGKYSEVFEAINITNNE 419
S+ARVYADVN RP+EYWDYE+ V WG Q+DY++VRK+GRGKYSEVFE IN+ NNE
Sbjct: 57 SKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNE 113
>08_02_0881 -
22216657-22216780,22216918-22217056,22217120-22217192,
22218260-22218357,22218516-22218542,22218625-22218715,
22218819-22218900,22219983-22220098
Length = 249
Score = 32.3 bits (70), Expect = 0.35
Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 17/123 (13%)
Frame = +3
Query: 345 YQLVRKLGRGKYSEVFEAINITNNEXXXXXXXXXXXXXXXXXXXXXLE----NLRGGTNI 512
++ +RK+G G Y EVFEA++I E E NI
Sbjct: 27 FRRIRKIGEGTYGEVFEAMDIITGERAALKKIKLDDGKEGFPRQILREIKLLKKLDHENI 86
Query: 513 ISLQAVVKDPVSRTPA-------------LIFEHVNNTDFKQLYSTLSDYDIRYYLYELL 653
I L+ +V P + A ++FE++++ D K++ + ++YY+ +LL
Sbjct: 87 IRLKEIVVSPGTAHGAGGSDDYMYRGDIYMVFEYMDH-DLKKVLHHSTPSQVKYYMEQLL 145
Query: 654 KAL 662
K L
Sbjct: 146 KGL 148
>12_01_0639 + 5383967-5385951,5386973-5387066,5387410-5387841,
5387935-5388219,5388324-5388641,5388756-5388983,
5389264-5389364,5389447-5389552,5389782-5390132,
5390262-5390401,5390687-5390861,5390937-5390954
Length = 1410
Score = 30.7 bits (66), Expect = 1.1
Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Frame = +3
Query: 339 EDYQLVRKLGRGKYSEVFEAINIT--NNEXXXXXXXXXXXXXXXXXXXXXLENLR--GGT 506
+ ++ + K+G+G YS V++A ++ N ++ LR
Sbjct: 830 DSFEKLDKIGQGTYSIVYKARDLETGNIVALKKVRFVNMDPESVRFMAREIKILRTLDHP 889
Query: 507 NIISLQAVVKDPVSRTPALIFEHVNNTDFKQLYST----LSDYDIRYYLYELLKAL 662
N+I LQ +V VS++ L+FE++ + D L +T LS+ I+ ++ +LL L
Sbjct: 890 NVIKLQGIVTSRVSQSLYLVFEYMEH-DLSGLIATPGLKLSEPQIKCFVQQLLHGL 944
>11_02_0032 +
7564153-7564719,7564844-7565128,7565207-7565524,
7565612-7565839,7566662-7566762,7566852-7566933,
7567230-7567364,7567460-7567516,7568030-7568167
Length = 636
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +3
Query: 339 EDYQLVRKLGRGKYSEVFEAINITNNEXXXXXXXXXXXXXXXXXXXXXLENL----RGGT 506
E ++ + K+G G YS V++A ++ + E L
Sbjct: 182 ESFEKLGKIGEGTYSSVYKARDLKTGKIVALKKVRFVNLDPESVRFMAREILVLRKLNHP 241
Query: 507 NIISLQAVVKDPVSRTPALIFEHVNN 584
N+I L+ ++ PVS + L+FE++ +
Sbjct: 242 NVIKLEGIIASPVSTSLYLVFEYMEH 267
>10_08_0365 +
17224777-17224852,17224949-17224989,17225175-17225244,
17225338-17225486,17225940-17226035,17226481-17226551,
17227077-17227138,17227311-17227374,17227463-17227547,
17227631-17227757,17228241-17228374,17228808-17229122
Length = 429
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 345 YQLVRKLGRGKYSEVFEAINITNNE 419
Y+L RK+G G + E++ +NI N E
Sbjct: 9 YKLGRKIGSGSFGELYLGVNIHNGE 33
>01_05_0406 +
21875376-21875451,21875570-21875610,21876245-21876314,
21876410-21876558,21876671-21876766,21876863-21876933,
21877119-21877267,21877400-21877463,21877547-21877631,
21878079-21878139,21879005-21879144,21879266-21879559
Length = 431
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 345 YQLVRKLGRGKYSEVFEAINITNNE 419
Y+L RKLG G + E++ N+ NE
Sbjct: 9 YRLGRKLGSGSFGEIYLGTNVQTNE 33
>04_04_0503 -
25701050-25701343,25701431-25701528,25701629-25701689,
25701772-25701842,25701922-25702048,25702160-25702244,
25702346-25702409,25702732-25702793,25703214-25703284,
25703700-25703795,25703960-25704108,25704196-25704265,
25704483-25704523,25704668-25704743
Length = 454
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +3
Query: 345 YQLVRKLGRGKYSEVFEAINITNNE 419
++L +K+G G + E++ A+NI N+E
Sbjct: 9 FKLGKKIGSGSFGELYLAVNIQNSE 33
>01_01_0752 - 5808798-5810183
Length = 461
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +3
Query: 345 YQLVRKLGRGKYSEVFEAINITNNE 419
Y+L R LG+G +++V+ A N+ +N+
Sbjct: 12 YELGRMLGQGTFAKVYHARNLASNQ 36
>01_01_0691 -
5328169-5328228,5328300-5328488,5328611-5328768,
5329677-5329767,5330359-5330438,5330472-5330533,
5330603-5330730,5331290-5331508,5331586-5331715,
5331804-5331870,5331968-5332062,5332150-5332221,
5332307-5332362,5332485-5332554,5332662-5332735,
5332820-5332954,5334135-5334314
Length = 621
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 321 VDWGNQEDYQLVRKLGRGKYSEVFEAINITN 413
V GN Y+L RKLG+G + +V+ I++
Sbjct: 61 VQIGNSPTYKLERKLGKGGFGQVYVGRRISS 91
>10_08_0741 +
20235463-20235497,20237624-20237753,20238748-20238915,
20239097-20239429,20239647-20239830,20239904-20240076
Length = 340
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Frame = +3
Query: 501 GTNIISLQAVVKDPV--SRTPALIFEHVNNTDFKQLYST---LSDYDIRYYLYELLKAL 662
G+ II+++ +++ P + I + +TD Q+ + L+D +Y+LY+LL+ L
Sbjct: 63 GSQIIAIKDIIRPPRRDNFNDVYIVSELMDTDLHQIIRSNQPLTDDHCQYFLYQLLRGL 121
>10_01_0322 + 3516922-3517899
Length = 325
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +3
Query: 498 GGTNIISLQAVVKDPVSRTPALIFEHVNNTDFKQLYSTLSDYDIRYYLYELLKA 659
G NI+ ++ VV DP S L+ E V + +L + +R+ + +L+ A
Sbjct: 103 GHPNIVQIKDVVADPKSGDVFLVMEFVEGSLRDELPRARPEKQVRFMMRQLIGA 156
>08_01_0090 -
649631-651162,653189-655019,655313-655365,655731-655735,
656209-656411,656837-657292,657718-657805,657917-658017,
658404-658631,659128-659445,659528-659812,660148-660711
Length = 1887
Score = 27.9 bits (59), Expect = 7.6
Identities = 26/116 (22%), Positives = 53/116 (45%), Gaps = 8/116 (6%)
Frame = +3
Query: 339 EDYQLVRKLGRGKYSEVFEAINITNNEXXXXXXXXXXXXXXXXXXXXXLEN--LR--GGT 506
E ++ + K+G+G YS V++A ++ + + E LR
Sbjct: 181 ESFEKLDKIGQGTYSSVYKARDLESGKIVALKKVRFANMDPESVRFMAREIHILRRLDHP 240
Query: 507 NIISLQAVVKDPVSRTPALIFEHVNNTDFKQLYST----LSDYDIRYYLYELLKAL 662
N+I L+ +V +S + L+FE++ + D L +T ++ ++ Y+ +LL L
Sbjct: 241 NVIKLEGLVTSRMSSSLYLVFEYMEH-DLAGLAATPGIKFTEPQVKCYMQQLLSGL 295
>04_01_0105 + 1098551-1100392
Length = 613
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 396 LQILHCISRDPACEPTDSLLGC 331
LQ+ H + RD EPT +L C
Sbjct: 361 LQLFHAMERDHGVEPTPDILAC 382
>01_05_0438 + 22142646-22143659,22144319-22144858
Length = 517
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 318 VVDWGNQEDYQLVRKLGRGKYSEVFEAINITNNE 419
VV +G+ E Y +R +G G VF A ++ E
Sbjct: 67 VVPFGSMESYDRLRLIGEGACGAVFRARHVATGE 100
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,558,303
Number of Sequences: 37544
Number of extensions: 228730
Number of successful extensions: 564
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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