Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23c02
         (678 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132865-18|CAJ76950.1|  282|Caenorhabditis elegans Hypothetical...    87   1e-17
AL132865-11|CAC42380.2|  265|Caenorhabditis elegans Hypothetical...    87   1e-17
AL132865-10|CAB60607.2|  279|Caenorhabditis elegans Hypothetical...    87   1e-17
AL132865-9|CAB60608.2|  276|Caenorhabditis elegans Hypothetical ...    87   1e-17
AL161712-8|CAC70133.1|  340|Caenorhabditis elegans Hypothetical ...    30   1.7  
AF002198-10|AAF99937.1|  471|Caenorhabditis elegans Hypothetical...    29   3.0  
AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical ...    28   5.3  
AF036701-1|AAB88368.2|  332|Caenorhabditis elegans Kinase, glh-b...    28   7.0  
AL132860-22|CAB60520.1|  282|Caenorhabditis elegans Hypothetical...    27   9.3  
AF106592-4|AAK21366.1|  786|Caenorhabditis elegans Hypothetical ...    27   9.3  
AF036706-14|AAK39276.2|  390|Caenorhabditis elegans Kinase, glh-...    27   9.3  

>AL132865-18|CAJ76950.1|  282|Caenorhabditis elegans Hypothetical
           protein Y62E10A.13d protein.
          Length = 282

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 42/72 (58%), Positives = 54/72 (75%), Gaps = 4/72 (5%)
 Frame = +1

Query: 103 EYAGFDENEPTSRSG----GKGLVVRRLKELHGYQRLVIVGDGATDAEASPPADGFIGFG 270
           +Y GFD +E TS SG    GK  V+  LK+++ Y+ +V+VGDGATD EASPPAD FIGFG
Sbjct: 187 KYHGFDTSELTSDSGSKETGKPAVIALLKKMYNYKTVVMVGDGATDVEASPPADAFIGFG 246

Query: 271 GNVVRDEVKKKA 306
           GNV+R+ VK +A
Sbjct: 247 GNVIREGVKARA 258


>AL132865-11|CAC42380.2|  265|Caenorhabditis elegans Hypothetical
           protein Y62E10A.13c protein.
          Length = 265

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 42/72 (58%), Positives = 54/72 (75%), Gaps = 4/72 (5%)
 Frame = +1

Query: 103 EYAGFDENEPTSRSG----GKGLVVRRLKELHGYQRLVIVGDGATDAEASPPADGFIGFG 270
           +Y GFD +E TS SG    GK  V+  LK+++ Y+ +V+VGDGATD EASPPAD FIGFG
Sbjct: 170 KYHGFDTSELTSDSGSKETGKPAVIALLKKMYNYKTVVMVGDGATDVEASPPADAFIGFG 229

Query: 271 GNVVRDEVKKKA 306
           GNV+R+ VK +A
Sbjct: 230 GNVIREGVKARA 241


>AL132865-10|CAB60607.2|  279|Caenorhabditis elegans Hypothetical
           protein Y62E10A.13b protein.
          Length = 279

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 42/72 (58%), Positives = 54/72 (75%), Gaps = 4/72 (5%)
 Frame = +1

Query: 103 EYAGFDENEPTSRSG----GKGLVVRRLKELHGYQRLVIVGDGATDAEASPPADGFIGFG 270
           +Y GFD +E TS SG    GK  V+  LK+++ Y+ +V+VGDGATD EASPPAD FIGFG
Sbjct: 184 KYHGFDTSELTSDSGSKETGKPAVIALLKKMYNYKTVVMVGDGATDVEASPPADAFIGFG 243

Query: 271 GNVVRDEVKKKA 306
           GNV+R+ VK +A
Sbjct: 244 GNVIREGVKARA 255


>AL132865-9|CAB60608.2|  276|Caenorhabditis elegans Hypothetical
           protein Y62E10A.13a protein.
          Length = 276

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 42/72 (58%), Positives = 54/72 (75%), Gaps = 4/72 (5%)
 Frame = +1

Query: 103 EYAGFDENEPTSRSG----GKGLVVRRLKELHGYQRLVIVGDGATDAEASPPADGFIGFG 270
           +Y GFD +E TS SG    GK  V+  LK+++ Y+ +V+VGDGATD EASPPAD FIGFG
Sbjct: 181 KYHGFDTSELTSDSGSKETGKPAVIALLKKMYNYKTVVMVGDGATDVEASPPADAFIGFG 240

Query: 271 GNVVRDEVKKKA 306
           GNV+R+ VK +A
Sbjct: 241 GNVIREGVKARA 252


>AL161712-8|CAC70133.1|  340|Caenorhabditis elegans Hypothetical
           protein Y66D12A.11 protein.
          Length = 340

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 14/55 (25%), Positives = 26/55 (47%)
 Frame = -1

Query: 282 HHVTPEANEAVSRWASLGIGSPVPDDHQALVPVQFLQSSHH*TFATRSRCWLVFI 118
           HHV  +  +  S  AS G  S    +H A+  +  ++      +++ S CWL+ +
Sbjct: 267 HHVIKQDKDIPSPGASSG--STQAPEHSAIPSISMIRKMERIFYSSESSCWLIVV 319


>AF002198-10|AAF99937.1|  471|Caenorhabditis elegans Hypothetical
           protein F35F10.12 protein.
          Length = 471

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -2

Query: 368 GSLRSRGAVFISTLCLD-YLQAAFFLTSSRTTLPPKPMKPSAGGLASASVAPSPTI 204
           G++    ++ I T+ +  YL  A++       LPP    P  GG+A A VAP+  +
Sbjct: 318 GNVDCEMSILIGTVPISKYLPPAYY--PQDPNLPPSQPTPIGGGVAPAGVAPAGVV 371


>AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical
           protein C07H6.3 protein.
          Length = 1378

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 299 FLTSSRTTLPPKPMKPSAGGLASASVAPSP 210
           F +S+R + PP+P   +A  L+ A   PSP
Sbjct: 275 FTSSARLSTPPRPTTTAAQSLSLAPQTPSP 304


>AF036701-1|AAB88368.2|  332|Caenorhabditis elegans Kinase,
           glh-binding protein 2 protein.
          Length = 332

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -1

Query: 309 GCLLLDFVTHHVTPEANEAVSRWASLGIGSPVPDDH 202
           GC+L + + H V     +   +W  +      PDDH
Sbjct: 216 GCILAEMINHTVLFPGKDIRDQWTQISSVLRTPDDH 251


>AL132860-22|CAB60520.1|  282|Caenorhabditis elegans Hypothetical
           protein Y56A3A.29a protein.
          Length = 282

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 218 PSPTITRRWYPCNSFSRLTTK 156
           PSP   R+W+ C  FS+  T+
Sbjct: 248 PSPLSARKWWGCKCFSKCNTE 268


>AF106592-4|AAK21366.1|  786|Caenorhabditis elegans Hypothetical
           protein D1037.1 protein.
          Length = 786

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 294 DFVTHHVTPEANEAVSRWASL 232
           DF  H    EANE +S WA+L
Sbjct: 573 DFDAHRALREANEQISLWAAL 593


>AF036706-14|AAK39276.2|  390|Caenorhabditis elegans Kinase,
           glh-binding protein 1 protein.
          Length = 390

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 9/36 (25%), Positives = 16/36 (44%)
 Frame = -1

Query: 309 GCLLLDFVTHHVTPEANEAVSRWASLGIGSPVPDDH 202
           GC+  + + H V     + + +W  +      PDDH
Sbjct: 227 GCIFAEMINHTVLFPGKDRIDQWTKIYSVLGTPDDH 262


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,352,445
Number of Sequences: 27780
Number of extensions: 283742
Number of successful extensions: 974
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)