Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23b21
         (626 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    26   0.85 
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    26   1.1  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   6.0  

>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 26.2 bits (55), Expect = 0.85
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 147 AWESYTINAQIIGTFPFEIYEKPQSQTPENTASTAG 254
           A E++T  A + G FPFE    P S    N + T G
Sbjct: 22  ALENFT--ASMAGAFPFEDLHDPASSIARNASFTLG 55


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 147 AWESYTINAQIIGTFPFEIYEKPQSQTPENTASTAG 254
           A E++T  A + G FPFE    P S    N + T G
Sbjct: 22  ALENFT--ASMAGAFPFEDLHDPASSFARNASFTLG 55


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +1

Query: 115  YNTFVKKGQKMPGKAIP 165
            YN   K G K P KAIP
Sbjct: 1590 YNAMKKMGSKKPLKAIP 1606


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,272
Number of Sequences: 2352
Number of extensions: 13214
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)