Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23b21
         (626 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00025-4|AAN65312.1|  606|Caenorhabditis elegans Hypothetical pr...    31   0.67 
U00025-3|AAA50619.1|  804|Caenorhabditis elegans Hypothetical pr...    31   0.67 
AB110824-1|BAD80739.1|  606|Caenorhabditis elegans chondroitin p...    31   0.67 
AB110823-1|BAD80738.1|  804|Caenorhabditis elegans chondroitin p...    31   0.67 
U23513-6|AAB36864.1| 1168|Caenorhabditis elegans Hypothetical pr...    28   4.8  
AL110498-7|CAB57909.2|  302|Caenorhabditis elegans Hypothetical ...    28   6.3  

>U00025-4|AAN65312.1|  606|Caenorhabditis elegans Hypothetical
           protein PAR2.4b protein.
          Length = 606

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 198 EIYEKPQSQTPENTASTAGWNDFVDGVHTKSSETLIIQ 311
           E+ EK + +TP   A  A  +   DGV  K   TLI+Q
Sbjct: 468 EMTEKEEKETPTEQAREAALSRLRDGVEPKRKRTLIVQ 505


>U00025-3|AAA50619.1|  804|Caenorhabditis elegans Hypothetical
           protein PAR2.4a protein.
          Length = 804

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 198 EIYEKPQSQTPENTASTAGWNDFVDGVHTKSSETLIIQ 311
           E+ EK + +TP   A  A  +   DGV  K   TLI+Q
Sbjct: 666 EMTEKEEKETPTEQAREAALSRLRDGVEPKRKRTLIVQ 703


>AB110824-1|BAD80739.1|  606|Caenorhabditis elegans chondroitin
           polymerizing factor-S protein.
          Length = 606

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 198 EIYEKPQSQTPENTASTAGWNDFVDGVHTKSSETLIIQ 311
           E+ EK + +TP   A  A  +   DGV  K   TLI+Q
Sbjct: 468 EMTEKEEKETPTEQAREAALSRLRDGVEPKRKRTLIVQ 505


>AB110823-1|BAD80738.1|  804|Caenorhabditis elegans chondroitin
           polymerizing factor protein.
          Length = 804

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 198 EIYEKPQSQTPENTASTAGWNDFVDGVHTKSSETLIIQ 311
           E+ EK + +TP   A  A  +   DGV  K   TLI+Q
Sbjct: 666 EMTEKEEKETPTEQAREAALSRLRDGVEPKRKRTLIVQ 703


>U23513-6|AAB36864.1| 1168|Caenorhabditis elegans Hypothetical
           protein D2021.1 protein.
          Length = 1168

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -3

Query: 228 GFGIVVFH-KSRKEMCQ*FEHLWYSFPRHLLSLFNKRVVRMCFI 100
           G G+V  H K  K   + F  L YSFP  +++L  K  + +C++
Sbjct: 134 GLGLVYLHFKQWKPAIEAFTRLLYSFPTGMIALQAKVRLGVCYM 177


>AL110498-7|CAB57909.2|  302|Caenorhabditis elegans Hypothetical
           protein Y64G10A.1 protein.
          Length = 302

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +2

Query: 404 WSDLQ*SVEWNFRRECM*NVFHC*CINNVP*CFYTCIKCT 523
           W   +  +EWN  R+C+   ++C C+       + C  CT
Sbjct: 128 WGKSRDKIEWNRTRKCLSGGYNCACVGESEQTKFEC-PCT 166


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,892,069
Number of Sequences: 27780
Number of extensions: 328032
Number of successful extensions: 841
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)