Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23b18
         (422 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72506-3|CAA96617.1|  310|Caenorhabditis elegans Hypothetical pr...    28   2.4  
AL117202-8|CAB57891.1|  547|Caenorhabditis elegans Hypothetical ...    28   3.2  
Z81554-2|CAB04504.1|  259|Caenorhabditis elegans Hypothetical pr...    26   9.7  

>Z72506-3|CAA96617.1|  310|Caenorhabditis elegans Hypothetical
           protein F07A5.2 protein.
          Length = 310

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = +2

Query: 32  ENAAYTLVSSNIPCVFNDSQNARLSSRDEVKEDPSRLPMRRRTPDIS 172
           E  A+ L+   IP V     NA    R   K  P   PM++ TP I+
Sbjct: 188 EFEAFELLVDGIPFVALSLMNAHPDLRGRFKPVPPPTPMKKHTPGIN 234


>AL117202-8|CAB57891.1|  547|Caenorhabditis elegans Hypothetical
           protein Y47D3A.11 protein.
          Length = 547

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
 Frame = +3

Query: 36  MQHTRWSRQIFRAFSTTPKMHDSRAVMKLKKIQADYQCEDGRPIYLKGGFFDRI-LYTST 212
           +Q+  W R  + +       HD  A +       +  CE   PI +K   FD   LYT+ 
Sbjct: 462 VQYLSWFRYGYESLVVNQFQHDQFANITCNANMNEQLCEKSGPIAIKNFSFDTANLYTNW 521

Query: 213 LVLCFV 230
           + + ++
Sbjct: 522 VAMIYL 527


>Z81554-2|CAB04504.1|  259|Caenorhabditis elegans Hypothetical
           protein F57G4.5 protein.
          Length = 259

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 83  DSQNARLSSRDEVKEDPSRLPMRRRTPDI 169
           DS+N+R  S    +ED    P+ +RTP I
Sbjct: 168 DSENSRQGSPIIFEEDIQECPLTKRTPKI 196


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,058,491
Number of Sequences: 27780
Number of extensions: 178490
Number of successful extensions: 514
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)