Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23b10
         (796 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    26   0.46 
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    25   1.1  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    25   1.1  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   2.5  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   3.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   5.7  
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    22   7.5  
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    22   7.5  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    22   7.5  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    22   7.5  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    22   7.5  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    22   7.5  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    22   7.5  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    22   7.5  

>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 25.8 bits (54), Expect = 0.46
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +2

Query: 464 EEFKGSRLYVTRARESFLERLQRERNEAQRKETE--KEQQHETIPNQNPIINLSEKL 628
           + +K  R Y  + RE+  ER +  R   + KE++      ++TI N N   N ++KL
Sbjct: 281 KSYKNEREY-RKYRETSKERFRDRRERERSKESKIISSLSNKTIHNNNNYKNYNKKL 336


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +2

Query: 485 LYVTRARESFLERLQRERNEAQRKETEKEQQH 580
           LY     ESF +R QRE     RK  EK  +H
Sbjct: 430 LYCLAGDESFRKRRQREAAGNCRKRGEKIARH 461


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +2

Query: 479 SRLYVTRARESFLERLQRERNEAQRKETEKEQQHE 583
           S L   R  +S   R Q  +NE QRKE E+ ++ E
Sbjct: 43  SSLNSLRNHKSIYHR-QHSKNEQQRKEMEQMRERE 76


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 14/56 (25%), Positives = 29/56 (51%)
 Frame = +2

Query: 524 LQRERNEAQRKETEKEQQHETIPNQNPIINLSEKLNPRKRKFESXVVNPYSDTEQQ 691
           + +E++    KET  +++ +T     P+I+ S K    ++K E   +N +  T +Q
Sbjct: 777 VNKEQSPNSTKETTPKKERKTATTTQPVIS-SRK---EQKKSEEKNINDHCVTTEQ 828


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +3

Query: 495 LELVKVFLKDYKEKGMKHKERKQKRNSSMRLYPTKIQSL 611
           L   K F+K  +E+  KH   K++ +   R    +++ L
Sbjct: 90  LTKAKRFIKSLEERERKHAVHKEQLSREQRFLRRRLEQL 128


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 764 FLLSWIPIFPLQIXDWI 714
           FL+ W+P F   I D I
Sbjct: 628 FLICWLPFFTCNIMDAI 644


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 248 YNFIENTNLHSQNNLNRVLEGYY 180
           YN+    N ++ NN N   + YY
Sbjct: 89  YNYSNYNNYNNNNNYNNYKKLYY 111


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 248 YNFIENTNLHSQNNLNRVLEGYY 180
           YN+    N ++ NN N   + YY
Sbjct: 89  YNYSNYNNYNNNNNYNNYKKLYY 111


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 248 YNFIENTNLHSQNNLNRVLEGYY 180
           YN+    N ++ NN N   + YY
Sbjct: 89  YNYSNYNNYNNNNNYNNYKKLYY 111


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 248 YNFIENTNLHSQNNLNRVLEGYY 180
           YN+    N ++ NN N   + YY
Sbjct: 89  YNYSNYNNYNNNNNYNNYKKLYY 111


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 248 YNFIENTNLHSQNNLNRVLEGYY 180
           YN+    N ++ NN N   + YY
Sbjct: 89  YNYSNYNNYNNNNNYNNYKKLYY 111


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 248 YNFIENTNLHSQNNLNRVLEGYY 180
           YN+    N ++ NN N   + YY
Sbjct: 89  YNYSNYNNYNNNNNYNNYKKLYY 111


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 248 YNFIENTNLHSQNNLNRVLEGYY 180
           YN+    N ++ NN N   + YY
Sbjct: 89  YNYSNYNNYNNNNNYNNYKKLYY 111


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 248 YNFIENTNLHSQNNLNRVLEGYY 180
           YN+    N ++ NN N   + YY
Sbjct: 89  YNYSNYNNYNNNNNYNNYKKLYY 111


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,647
Number of Sequences: 438
Number of extensions: 3864
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)