Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23b08
(723 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY052059-1|AAK93483.1| 469|Drosophila melanogaster LP08712p pro... 185 5e-47
AE014297-916|AAF54364.1| 469|Drosophila melanogaster CG8129-PB,... 185 5e-47
AE014297-917|AAF54365.1| 316|Drosophila melanogaster CG8129-PA,... 65 8e-11
AY058508-1|AAL13737.1| 522|Drosophila melanogaster LD21426p pro... 46 7e-05
AE014298-3078|AAF50863.1| 522|Drosophila melanogaster CG1753-PB... 46 7e-05
AE014298-3077|AAF50862.1| 522|Drosophila melanogaster CG1753-PA... 46 7e-05
AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein. 31 2.1
AY089299-1|AAL90037.1| 402|Drosophila melanogaster AT09807p pro... 29 8.5
AE014297-3270|AAF56095.2| 402|Drosophila melanogaster CG17110-P... 29 8.5
>AY052059-1|AAK93483.1| 469|Drosophila melanogaster LP08712p
protein.
Length = 469
Score = 185 bits (451), Expect = 5e-47
Identities = 85/186 (45%), Positives = 120/186 (64%)
Frame = +1
Query: 166 DENCDPNNPRKIKYDDILAASRRIVGAVVRTPCTRAHMSERLGMDIYFKQEFLQYTGSFK 345
D C+P P++I + D+ +A+ I G V RTPC ++ S+ GM++Y K++FLQYTGSFK
Sbjct: 48 DPFCNPEKPQRISFHDVTSAAFLIRGGVERTPCPKSTSSDLYGMELYLKKDFLQYTGSFK 107
Query: 346 ERGVRNALISLSDEQKKNGVIAASTGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCE 525
ERG R AL+SL++EQK+ GVI+AS GNH AL YH +L IP VV+P + K+ KC
Sbjct: 108 ERGARYALLSLTEEQKRTGVISASLGNHAQALCYHGWKLNIPVTVVMPKAAPIMKIQKCR 167
Query: 526 QLGAKVFKHGIDMSAAKLHAMSLGKEKKMIYINGYDHPDVLAXXXXXXXXXXXXLPNVDA 705
A+V G DM AK AM + +E+ ++Y+NGYDHP ++A +P DA
Sbjct: 168 NYKARVIVDGNDMGEAKSLAMRMSREEGLLYVNGYDHPHIMAGQGTIGLEILEQVPEPDA 227
Query: 706 VLIPVG 723
V++PVG
Sbjct: 228 VVVPVG 233
>AE014297-916|AAF54364.1| 469|Drosophila melanogaster CG8129-PB,
isoform B protein.
Length = 469
Score = 185 bits (451), Expect = 5e-47
Identities = 85/186 (45%), Positives = 120/186 (64%)
Frame = +1
Query: 166 DENCDPNNPRKIKYDDILAASRRIVGAVVRTPCTRAHMSERLGMDIYFKQEFLQYTGSFK 345
D C+P P++I + D+ +A+ I G V RTPC ++ S+ GM++Y K++FLQYTGSFK
Sbjct: 48 DPFCNPEKPQRISFHDVTSAAFLIRGGVERTPCPKSTSSDLYGMELYLKKDFLQYTGSFK 107
Query: 346 ERGVRNALISLSDEQKKNGVIAASTGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCE 525
ERG R AL+SL++EQK+ GVI+AS GNH AL YH +L IP VV+P + K+ KC
Sbjct: 108 ERGARYALLSLTEEQKRTGVISASLGNHAQALCYHGWKLNIPVTVVMPKAAPIMKIQKCR 167
Query: 526 QLGAKVFKHGIDMSAAKLHAMSLGKEKKMIYINGYDHPDVLAXXXXXXXXXXXXLPNVDA 705
A+V G DM AK AM + +E+ ++Y+NGYDHP ++A +P DA
Sbjct: 168 NYKARVIVDGNDMGEAKSLAMRMSREEGLLYVNGYDHPHIMAGQGTIGLEILEQVPEPDA 227
Query: 706 VLIPVG 723
V++PVG
Sbjct: 228 VVVPVG 233
>AE014297-917|AAF54365.1| 316|Drosophila melanogaster CG8129-PA,
isoform A protein.
Length = 316
Score = 65.3 bits (152), Expect = 8e-11
Identities = 29/80 (36%), Positives = 44/80 (55%)
Frame = +1
Query: 484 VPIHTALNKVNKCEQLGAKVFKHGIDMSAAKLHAMSLGKEKKMIYINGYDHPDVLAXXXX 663
+P + K+ KC A+V G DM AK AM + +E+ ++Y+NGYDHP ++A
Sbjct: 1 MPKAAPIMKIQKCRNYKARVIVDGNDMGEAKSLAMRMSREEGLLYVNGYDHPHIMAGQGT 60
Query: 664 XXXXXXXXLPNVDAVLIPVG 723
+P DAV++PVG
Sbjct: 61 IGLEILEQVPEPDAVVVPVG 80
>AY058508-1|AAL13737.1| 522|Drosophila melanogaster LD21426p
protein.
Length = 522
Score = 45.6 bits (103), Expect = 7e-05
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Frame = +1
Query: 235 IVGAVVRTPCTRAHMSERLGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQK--KNG-- 402
++G S+ + ++Y K EFL GS K+R + ++ ++EQ K G
Sbjct: 52 VIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDR-IGYRMVQDAEEQGLLKPGYT 110
Query: 403 VIAASTGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCEQLGAKVFK 549
+I ++GN G L+ G CI+V+P + KV+ LGAK+ +
Sbjct: 111 IIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIR 159
>AE014298-3078|AAF50863.1| 522|Drosophila melanogaster CG1753-PB,
isoform B protein.
Length = 522
Score = 45.6 bits (103), Expect = 7e-05
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Frame = +1
Query: 235 IVGAVVRTPCTRAHMSERLGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQK--KNG-- 402
++G S+ + ++Y K EFL GS K+R + ++ ++EQ K G
Sbjct: 52 VIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDR-IGYRMVQDAEEQGLLKPGYT 110
Query: 403 VIAASTGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCEQLGAKVFK 549
+I ++GN G L+ G CI+V+P + KV+ LGAK+ +
Sbjct: 111 IIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIR 159
>AE014298-3077|AAF50862.1| 522|Drosophila melanogaster CG1753-PA,
isoform A protein.
Length = 522
Score = 45.6 bits (103), Expect = 7e-05
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Frame = +1
Query: 235 IVGAVVRTPCTRAHMSERLGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQK--KNG-- 402
++G S+ + ++Y K EFL GS K+R + ++ ++EQ K G
Sbjct: 52 VIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDR-IGYRMVQDAEEQGLLKPGYT 110
Query: 403 VIAASTGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCEQLGAKVFK 549
+I ++GN G L+ G CI+V+P + KV+ LGAK+ +
Sbjct: 111 IIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIR 159
>AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein.
Length = 433
Score = 30.7 bits (66), Expect = 2.1
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -2
Query: 596 PKLIACNLAADMSIPCLKTFAPSCS 522
P ++CNLA + +PC + F +C+
Sbjct: 221 PACVSCNLAPHLPVPCTRIFCANCT 245
>AY089299-1|AAL90037.1| 402|Drosophila melanogaster AT09807p
protein.
Length = 402
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 400 GVIAASTGNHGAALSYHSTQLGIPCIVVVPI-HTALNKVNKCEQLGAKVFKHGIDM 564
G+I + GA S++ Q+GIP + PI +T + N E L A + HGI +
Sbjct: 336 GLITHTRVFPGATDSFYVRQVGIPALGFSPINNTPVLLHNHDEYLRADTYLHGIQV 391
>AE014297-3270|AAF56095.2| 402|Drosophila melanogaster CG17110-PA
protein.
Length = 402
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 400 GVIAASTGNHGAALSYHSTQLGIPCIVVVPI-HTALNKVNKCEQLGAKVFKHGIDM 564
G+I + GA S++ Q+GIP + PI +T + N E L A + HGI +
Sbjct: 336 GLITHTRVFPGATDSFYVRQVGIPALGFSPINNTPVLLHNHDEYLRADTYLHGIQV 391
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,724,860
Number of Sequences: 53049
Number of extensions: 626883
Number of successful extensions: 1474
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1471
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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