Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23b02
(214 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P04350 Cluster: Tubulin beta-4 chain; n=4602; root|Rep:... 128 2e-29
UniRef50_Q9VAX7 Cluster: CG4869-PA; n=8; Eukaryota|Rep: CG4869-P... 118 3e-26
UniRef50_P52275 Cluster: Tubulin beta-2 chain; n=115; Bilateria|... 117 5e-26
UniRef50_UPI0000E4A877 Cluster: PREDICTED: similar to beta-tubul... 114 4e-25
UniRef50_A2FXL6 Cluster: Tubulin beta chain, putative; n=1; Tric... 110 5e-24
UniRef50_UPI00005A581E Cluster: PREDICTED: similar to tubulin, b... 109 1e-23
UniRef50_Q227Z6 Cluster: Tubulin/FtsZ family, GTPase domain cont... 92 3e-18
UniRef50_UPI00005639CD Cluster: UPI00005639CD related cluster; n... 90 8e-18
UniRef50_Q402S5 Cluster: Beta-tubulin; n=6; Trichocomaceae|Rep: ... 86 1e-16
UniRef50_Q8J1D5 Cluster: Beta-tubulin; n=5; Pezizomycotina|Rep: ... 73 2e-12
UniRef50_Q26236 Cluster: Beta-tubulin; n=5; Eukaryota|Rep: Beta-... 68 5e-11
UniRef50_A4HVG1 Cluster: Alpha tubulin; n=2; Leishmania|Rep: Alp... 63 1e-09
UniRef50_Q4SEQ2 Cluster: Chromosome 3 SCAF14614, whole genome sh... 61 6e-09
UniRef50_Q8N532 Cluster: TUBA1C protein; n=9; Amniota|Rep: TUBA1... 61 6e-09
UniRef50_P68363 Cluster: Tubulin alpha-1B chain; n=970; Eukaryot... 61 6e-09
UniRef50_Q3HRW7 Cluster: Alpha-tubulin-like protein; n=3; Eukary... 60 7e-09
UniRef50_Q9VRX3 Cluster: Probable tubulin beta chain CG32396; n=... 60 7e-09
UniRef50_Q86ZZ0 Cluster: Alpha-tubulin; n=2; Pansporablastina|Re... 56 1e-07
UniRef50_P09733 Cluster: Tubulin alpha-1 chain; n=493; Eukaryota... 56 2e-07
UniRef50_UPI00005A03AE Cluster: PREDICTED: similar to tubulin, a... 56 2e-07
UniRef50_UPI0000DB78C0 Cluster: PREDICTED: similar to Tubulin al... 55 3e-07
UniRef50_Q3UX10 Cluster: In vitro fertilized eggs cDNA, RIKEN fu... 55 3e-07
UniRef50_A7NXT4 Cluster: Chromosome chr5 scaffold_2, whole genom... 55 4e-07
UniRef50_P78672 Cluster: Beta-tubulin; n=3; Hypocreales|Rep: Bet... 54 5e-07
UniRef50_A1CPB9 Cluster: Tubulin gamma chain; n=9; Fungi/Metazoa... 54 8e-07
UniRef50_Q7Z1L8 Cluster: Alpha-tubulin; n=2; Eukaryota|Rep: Alph... 53 1e-06
UniRef50_Q3ZJ98 Cluster: Tubulin gamma subunit; n=1; Monocercomo... 52 2e-06
UniRef50_Q5B300 Cluster: Putative uncharacterized protein; n=1; ... 52 2e-06
UniRef50_Q2U1M2 Cluster: Beta tubulin; n=649; root|Rep: Beta tub... 52 2e-06
UniRef50_A4H729 Cluster: Alpha tubulin; n=5; Trypanosomatidae|Re... 51 4e-06
UniRef50_Q24D61 Cluster: Tubulin/FtsZ family, GTPase domain cont... 51 6e-06
UniRef50_P54401 Cluster: Tubulin gamma chain; n=3; Entamoeba his... 51 6e-06
UniRef50_A6RQ51 Cluster: Putative uncharacterized protein; n=1; ... 50 1e-05
UniRef50_P23258 Cluster: Tubulin gamma-1 chain; n=213; cellular ... 50 1e-05
UniRef50_UPI00005A4366 Cluster: PREDICTED: similar to tubulin, a... 50 1e-05
UniRef50_Q7R2Q0 Cluster: GLP_546_6876_8351; n=1; Giardia lamblia... 49 2e-05
UniRef50_Q0D0J3 Cluster: Tubulin gamma chain; n=6; Fungi/Metazoa... 48 5e-05
UniRef50_A6RFR4 Cluster: Tubulin gamma chain; n=1; Ajellomyces c... 48 5e-05
UniRef50_Q24D62 Cluster: Tubulin/FtsZ family, GTPase domain cont... 47 7e-05
UniRef50_A2EAH1 Cluster: Gamma tubulin, putative; n=5; Eukaryota... 46 2e-04
UniRef50_Q8J1W3 Cluster: Beta-tubulin; n=1; Colletotrichum sp.|R... 46 2e-04
UniRef50_UPI0000E7FE1E Cluster: PREDICTED: hypothetical protein;... 45 3e-04
UniRef50_Q862L2 Cluster: Similar to alpha-tubulin isoform 1; n=1... 45 4e-04
UniRef50_A7M6D9 Cluster: Alpha-tubulin; n=1; Dugesia ryukyuensis... 43 0.001
UniRef50_Q4S6A2 Cluster: Chromosome 9 SCAF14729, whole genome sh... 42 0.004
UniRef50_P34475 Cluster: Tubulin gamma chain; n=2; Caenorhabditi... 41 0.005
UniRef50_Q3SEF9 Cluster: Alpha-tubulin,putative; n=1; Paramecium... 40 0.008
UniRef50_A0JJL8 Cluster: Beta-tubulin; n=13; Sordariomycetes|Rep... 40 0.011
UniRef50_A5HWB6 Cluster: Bacterial tubulin B; n=8; Prosthecobact... 40 0.015
UniRef50_A5HWB9 Cluster: Bacterial tubulin A2; n=7; Prosthecobac... 39 0.019
UniRef50_Q4UCK3 Cluster: Tubulin gamma-chain (Gamma-tubulin), pu... 37 0.10
UniRef50_Q3SEG3 Cluster: Beta tubulin,putative; n=2; Paramecium ... 37 0.10
UniRef50_UPI00003977B9 Cluster: hypothetical protein Haso0200227... 36 0.18
UniRef50_Q23WP5 Cluster: Tubulin/FtsZ family, GTPase domain cont... 36 0.18
UniRef50_UPI00006CA67A Cluster: Tubulin/FtsZ family, GTPase doma... 36 0.24
UniRef50_A0BQ86 Cluster: Chromosome undetermined scaffold_120, w... 35 0.31
UniRef50_Q8SRD2 Cluster: Tubulin gamma chain; n=1; Encephalitozo... 35 0.31
UniRef50_UPI0000DC0F37 Cluster: UPI0000DC0F37 related cluster; n... 35 0.41
UniRef50_Q2A9A4 Cluster: Putative uncharacterized protein; n=2; ... 34 0.72
UniRef50_Q3SEH6 Cluster: Iota_tubulin,putative; n=2; Paramecium ... 34 0.72
UniRef50_Q4S633 Cluster: Chromosome 9 SCAF14729, whole genome sh... 33 1.3
UniRef50_UPI0000EB04B1 Cluster: UPI0000EB04B1 related cluster; n... 33 1.7
UniRef50_Q585R2 Cluster: Putative uncharacterized protein; n=1; ... 33 1.7
UniRef50_Q22CD2 Cluster: Tubulin/FtsZ family, GTPase domain cont... 33 1.7
UniRef50_Q9K3T7 Cluster: Putative membrane protein; n=2; Strepto... 32 2.9
UniRef50_A5EBQ4 Cluster: Putative N-hydroxyarylamine O-acetyltra... 32 2.9
UniRef50_O44453 Cluster: Putative uncharacterized protein; n=2; ... 32 2.9
UniRef50_A0EC94 Cluster: Chromosome undetermined scaffold_89, wh... 32 2.9
UniRef50_Q22UN3 Cluster: Tubulin/FtsZ family, GTPase domain cont... 31 3.9
UniRef50_Q0HHZ2 Cluster: DNA polymerase III, subunits gamma and ... 31 5.1
UniRef50_A1FVI0 Cluster: SNF2-related; n=1; Stenotrophomonas mal... 31 5.1
UniRef50_UPI00006CBC09 Cluster: hydrolase, alpha/beta fold famil... 31 6.7
UniRef50_A3LPM8 Cluster: Mannosyltransferase; n=4; Saccharomycet... 31 6.7
>UniRef50_P04350 Cluster: Tubulin beta-4 chain; n=4602; root|Rep:
Tubulin beta-4 chain - Homo sapiens (Human)
Length = 444
Score = 128 bits (309), Expect = 2e-29
Identities = 55/70 (78%), Positives = 63/70 (90%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRP 181
HGIDP+G YHGDSDLQLERINVYYNEA+ G YVPR VL+DL+P TMD+VRSGPFG +FRP
Sbjct: 28 HGIDPTGTYHGDSDLQLERINVYYNEATGGNYVPRAVLVDLEPGTMDSVRSGPFGQIFRP 87
Query: 182 DNFVYGQNCA 211
DNFV+GQ+ A
Sbjct: 88 DNFVFGQSGA 97
>UniRef50_Q9VAX7 Cluster: CG4869-PA; n=8; Eukaryota|Rep: CG4869-PA -
Drosophila melanogaster (Fruit fly)
Length = 522
Score = 118 bits (283), Expect = 3e-26
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRP 181
HGIDP+G YHG+S LQ ERI+VYYNEAS+GKYVPR VLIDL+P TMD+VR P G LFRP
Sbjct: 28 HGIDPNGYYHGESALQHERIDVYYNEASSGKYVPRAVLIDLEPGTMDSVRQSPVGQLFRP 87
Query: 182 DNFVYGQNCA 211
DNFVYGQ+ A
Sbjct: 88 DNFVYGQSGA 97
>UniRef50_P52275 Cluster: Tubulin beta-2 chain; n=115;
Bilateria|Rep: Tubulin beta-2 chain - Caenorhabditis
elegans
Length = 450
Score = 117 bits (282), Expect = 5e-26
Identities = 51/70 (72%), Positives = 61/70 (87%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRP 181
HGI P G + G++DLQLERI+VYYNEA+ GKYVPR VL+DL+P TMD+VRSGPFG LFRP
Sbjct: 28 HGIQPDGTFKGETDLQLERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRP 87
Query: 182 DNFVYGQNCA 211
DNFV+GQ+ A
Sbjct: 88 DNFVFGQSGA 97
>UniRef50_UPI0000E4A877 Cluster: PREDICTED: similar to beta-tubulin,
partial; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to beta-tubulin, partial -
Strongylocentrotus purpuratus
Length = 224
Score = 114 bits (274), Expect = 4e-25
Identities = 48/67 (71%), Positives = 59/67 (88%)
Frame = +2
Query: 11 DPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNF 190
DP+G Y GDSDLQLERINVYYNEA+ G+YVPR VL+DL+P T+D+V SGPFG +FRPDNF
Sbjct: 2 DPTGTYQGDSDLQLERINVYYNEAAGGQYVPRAVLLDLEPGTLDSVHSGPFGQIFRPDNF 61
Query: 191 VYGQNCA 211
++GQ+ A
Sbjct: 62 IFGQSGA 68
>UniRef50_A2FXL6 Cluster: Tubulin beta chain, putative; n=1;
Trichomonas vaginalis G3|Rep: Tubulin beta chain,
putative - Trichomonas vaginalis G3
Length = 168
Score = 110 bits (265), Expect = 5e-24
Identities = 46/70 (65%), Positives = 60/70 (85%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRP 181
HG+DP+G Y+GDSDLQLE INVY+NEA +YVPR VL+D++P TMD+VR+G +G LFRP
Sbjct: 29 HGVDPTGKYYGDSDLQLENINVYFNEAINTRYVPRAVLVDMEPGTMDSVRAGQYGQLFRP 88
Query: 182 DNFVYGQNCA 211
DNF++GQ+ A
Sbjct: 89 DNFIFGQSGA 98
>UniRef50_UPI00005A581E Cluster: PREDICTED: similar to tubulin, beta
3; n=2; Canis lupus familiaris|Rep: PREDICTED: similar
to tubulin, beta 3 - Canis familiaris
Length = 363
Score = 109 bits (262), Expect = 1e-23
Identities = 47/68 (69%), Positives = 58/68 (85%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRP 181
H IDPSG Y GDSDLQLERI+VYY EAS+ KY+PR + +DL+P T+D+VRSG FG LFRP
Sbjct: 28 HSIDPSGNYVGDSDLQLERISVYYKEASSHKYMPRAIRVDLEPGTLDSVRSGAFGHLFRP 87
Query: 182 DNFVYGQN 205
DNF++GQ+
Sbjct: 88 DNFIFGQS 95
>UniRef50_Q227Z6 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 436
Score = 91.9 bits (218), Expect = 3e-18
Identities = 38/70 (54%), Positives = 53/70 (75%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRP 181
HGI P+G + GDSDLQLE+I+VYYN+ A KYVPR +LIDL PA ++++ + G LF+P
Sbjct: 28 HGIQPTGVHKGDSDLQLEKIDVYYNQTKADKYVPRAILIDLDPALLNSINTSQIGQLFKP 87
Query: 182 DNFVYGQNCA 211
+N + GQ+ A
Sbjct: 88 ENLIIGQDPA 97
>UniRef50_UPI00005639CD Cluster: UPI00005639CD related cluster; n=1;
Mus musculus|Rep: UPI00005639CD UniRef100 entry - Mus
musculus
Length = 377
Score = 90.2 bits (214), Expect = 8e-18
Identities = 42/70 (60%), Positives = 52/70 (74%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRP 181
H I P+G YHGDSDLQLERI+VYYNEA+ G YV R L+DL+P+T+D+V SGPFG
Sbjct: 28 HSIKPTGTYHGDSDLQLERISVYYNEATGGNYVSRAALVDLEPSTVDSVCSGPFG---SS 84
Query: 182 DNFVYGQNCA 211
V+GQ+ A
Sbjct: 85 QKTVFGQSGA 94
>UniRef50_Q402S5 Cluster: Beta-tubulin; n=6; Trichocomaceae|Rep:
Beta-tubulin - Thysanophora penicillioides
Length = 62
Score = 86.2 bits (204), Expect = 1e-16
Identities = 36/55 (65%), Positives = 45/55 (81%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFG 166
HG+D G Y+G SDLQLER+NVY+ AS +YVPR VL+DL+P TMDA+R+GPFG
Sbjct: 7 HGLDGDGHYNGTSDLQLERMNVYFTAASGDRYVPRAVLVDLEPGTMDAIRAGPFG 61
>UniRef50_Q8J1D5 Cluster: Beta-tubulin; n=5; Pezizomycotina|Rep:
Beta-tubulin - Nephromopsis leucostigma
Length = 239
Score = 72.5 bits (170), Expect = 2e-12
Identities = 32/45 (71%), Positives = 38/45 (84%)
Frame = +2
Query: 77 EASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCA 211
+AS KYVPR VL+DL+P TMDAVR+GPF LFRPDNFV+GQ+ A
Sbjct: 4 QASNNKYVPRAVLVDLEPGTMDAVRAGPFXQLFRPDNFVFGQSGA 48
>UniRef50_Q26236 Cluster: Beta-tubulin; n=5; Eukaryota|Rep:
Beta-tubulin - Reticulomyxa filosa
Length = 473
Score = 67.7 bits (158), Expect = 5e-11
Identities = 27/66 (40%), Positives = 46/66 (69%)
Frame = +2
Query: 14 PSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFV 193
PS H D ++L++I VY+ EA +YVPR +L+DL+P ++ +++ P G +F+PDNF+
Sbjct: 39 PSQNKHHDQ-IRLDKIGVYFREAGEKRYVPRAILVDLEPGILEVIKAAPTGKMFKPDNFI 97
Query: 194 YGQNCA 211
+G + A
Sbjct: 98 FGASGA 103
>UniRef50_A4HVG1 Cluster: Alpha tubulin; n=2; Leishmania|Rep: Alpha
tubulin - Leishmania infantum
Length = 327
Score = 63.3 bits (147), Expect = 1e-09
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLE--RINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLF 175
HGI P G D + +E N +++E AGK+VPR + +DL+P +D VR+G + LF
Sbjct: 120 HGIQPDGSMPSDKCIGVEDDAFNTFFSETGAGKHVPRCIFLDLEPTVVDEVRTGTYRQLF 179
Query: 176 RPDNFVYGQNCAA 214
P+ V G+ AA
Sbjct: 180 NPEQLVSGKEDAA 192
>UniRef50_Q4SEQ2 Cluster: Chromosome 3 SCAF14614, whole genome
shotgun sequence; n=2; Euteleostomi|Rep: Chromosome 3
SCAF14614, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 407
Score = 60.9 bits (141), Expect = 6e-09
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQL--ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLF 175
HGI P G D + + N +++E AGK+VPR V +DL+P +D VR+G + LF
Sbjct: 33 HGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLF 92
Query: 176 RPDNFVYGQNCAA 214
P+ + G+ AA
Sbjct: 93 HPEQLITGKEDAA 105
>UniRef50_Q8N532 Cluster: TUBA1C protein; n=9; Amniota|Rep: TUBA1C
protein - Homo sapiens (Human)
Length = 325
Score = 60.9 bits (141), Expect = 6e-09
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQL--ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLF 175
HGI P G D + + N +++E AGK+VPR V +DL+P +D VR+G + LF
Sbjct: 28 HGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLF 87
Query: 176 RPDNFVYGQNCAA 214
P+ + G+ AA
Sbjct: 88 HPEQLITGKEDAA 100
>UniRef50_P68363 Cluster: Tubulin alpha-1B chain; n=970;
Eukaryota|Rep: Tubulin alpha-1B chain - Homo sapiens
(Human)
Length = 451
Score = 60.9 bits (141), Expect = 6e-09
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQL--ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLF 175
HGI P G D + + N +++E AGK+VPR V +DL+P +D VR+G + LF
Sbjct: 28 HGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLF 87
Query: 176 RPDNFVYGQNCAA 214
P+ + G+ AA
Sbjct: 88 HPEQLITGKEDAA 100
>UniRef50_Q3HRW7 Cluster: Alpha-tubulin-like protein; n=3;
Eukaryota|Rep: Alpha-tubulin-like protein - Solanum
tuberosum (Potato)
Length = 237
Score = 60.5 bits (140), Expect = 7e-09
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQL--ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLF 175
HGI P G D + + N +++E AGK+VPR V +DL+P +D VR+G + LF
Sbjct: 28 HGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLF 87
Query: 176 RPDNFVYGQNCAA 214
P+ + G+ AA
Sbjct: 88 HPEQLISGKEDAA 100
>UniRef50_Q9VRX3 Cluster: Probable tubulin beta chain CG32396; n=1;
Drosophila melanogaster|Rep: Probable tubulin beta chain
CG32396 - Drosophila melanogaster (Fruit fly)
Length = 462
Score = 60.5 bits (140), Expect = 7e-09
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Frame = +2
Query: 2 HGID-PSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFR 178
HG+D SG + G S LQLERINV++N ++ ++ RT+LID + +T+ + + L+R
Sbjct: 28 HGVDYASGRFGGTSPLQLERINVFFNATASKRFYARTILIDTEASTIQRLNAS--SQLYR 85
Query: 179 PDNFVYGQNCA 211
P+NFV G A
Sbjct: 86 PENFVAGSESA 96
>UniRef50_Q86ZZ0 Cluster: Alpha-tubulin; n=2; Pansporablastina|Rep:
Alpha-tubulin - Trachipleistophora hominis
Length = 386
Score = 56.4 bits (130), Expect = 1e-07
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDL-QLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFR 178
HGI P G D + + + +++E+ YVPRTV+IDL+P +++V+ GPF LF
Sbjct: 6 HGIQPDG--RPDENFGRNDSCLSFFSESCENTYVPRTVMIDLEPGVIESVQKGPFKKLFH 63
Query: 179 PDNFVYGQNCAA 214
P+ ++G+ AA
Sbjct: 64 PEQLIHGKEDAA 75
>UniRef50_P09733 Cluster: Tubulin alpha-1 chain; n=493;
Eukaryota|Rep: Tubulin alpha-1 chain - Saccharomyces
cerevisiae (Baker's yeast)
Length = 447
Score = 56.0 bits (129), Expect = 2e-07
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQL-----ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFG 166
HGI P G H + L E + +++E GK+VPR + +DL+P +D VR+GP+
Sbjct: 28 HGIKPDG--HLEDGLSKPKGGEEGFSTFFHETGYGKFVPRAIYVDLEPNVIDEVRNGPYK 85
Query: 167 CLFRPDNFVYGQNCAA 214
LF P+ + G+ AA
Sbjct: 86 DLFHPEQLISGKEDAA 101
>UniRef50_UPI00005A03AE Cluster: PREDICTED: similar to tubulin,
alpha 1; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to tubulin, alpha 1 - Canis familiaris
Length = 300
Score = 55.6 bits (128), Expect = 2e-07
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQL--ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLF 175
HGI P D + N ++E AGK+VPR V +DL+P +D VR+G + LF
Sbjct: 72 HGIQPDAQMPSDKTTGGGDDSFNTLFSETGAGKHVPRAVFVDLEPTVIDKVRTGTYRQLF 131
Query: 176 RPDNFVYGQNCAA 214
P+ + G+ AA
Sbjct: 132 HPEQLITGKEDAA 144
>UniRef50_UPI0000DB78C0 Cluster: PREDICTED: similar to Tubulin
alpha-6 chain (Alpha-tubulin 6) (Alpha-tubulin isotype
M-alpha-6); n=1; Apis mellifera|Rep: PREDICTED: similar
to Tubulin alpha-6 chain (Alpha-tubulin 6)
(Alpha-tubulin isotype M-alpha-6) - Apis mellifera
Length = 542
Score = 55.2 bits (127), Expect = 3e-07
Identities = 24/71 (33%), Positives = 42/71 (59%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRP 181
HGI P+GC + +++E+ K PRT++IDL+P+ +D +++G + LF P
Sbjct: 31 HGISPNGCLRQGYYPTDPTMCAFFSESQVRKLTPRTMIIDLEPSVIDEIKTGDYKQLFSP 90
Query: 182 DNFVYGQNCAA 214
D+ V G+ A+
Sbjct: 91 DSLVTGKQDAS 101
>UniRef50_Q3UX10 Cluster: In vitro fertilized eggs cDNA, RIKEN
full-length enriched library, clone:7420443F16
product:similar to Alpha tubulin; n=4; Murinae|Rep: In
vitro fertilized eggs cDNA, RIKEN full-length enriched
library, clone:7420443F16 product:similar to Alpha
tubulin - Mus musculus (Mouse)
Length = 446
Score = 55.2 bits (127), Expect = 3e-07
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
Frame = +2
Query: 2 HGIDPSGCY--HGDSDLQ---LERINV----YYNEASAGKYVPRTVLIDLKPATMDAVRS 154
HGI P G H +L+ +E +N +++E AGK+VPRT+ +DL+P +D +R
Sbjct: 28 HGIQPDGFILDHQHDNLENPKVEHMNASLDTFFHETRAGKHVPRTLFMDLEPTVIDGIRV 87
Query: 155 GPFGCLFRPDNFVYGQNCAA 214
G + LF P+ V G+ AA
Sbjct: 88 GRYHSLFHPEQLVNGKEDAA 107
>UniRef50_A7NXT4 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 100
Score = 54.8 bits (126), Expect = 4e-07
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPR 106
H ID G Y GD +LQLE++NVYYNEA+ G++VPR
Sbjct: 28 HDIDSIGRYQGDMELQLEQVNVYYNEANCGRFVPR 62
>UniRef50_P78672 Cluster: Beta-tubulin; n=3; Hypocreales|Rep:
Beta-tubulin - Gibberella pulicaris
Length = 93
Score = 54.4 bits (125), Expect = 5e-07
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEASAGKYVP 103
HG+D +G Y G S+LQLER++VY+NEAS KYVP
Sbjct: 24 HGLDSNGVYSGTSELQLERMSVYFNEASGNKYVP 57
>UniRef50_A1CPB9 Cluster: Tubulin gamma chain; n=9; Fungi/Metazoa
group|Rep: Tubulin gamma chain - Aspergillus clavatus
Length = 488
Score = 53.6 bits (123), Expect = 8e-07
Identities = 21/67 (31%), Positives = 41/67 (61%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRP 181
HGI G + +R +V++ ++ +Y+PR +L+DL+P + +++SGP+ ++ P
Sbjct: 43 HGISQDGNLEEFATEGGDRKDVFFYQSDDTRYIPRAILLDLEPRVLHSIQSGPYKNIYNP 102
Query: 182 DNFVYGQ 202
+NF GQ
Sbjct: 103 ENFFIGQ 109
>UniRef50_Q7Z1L8 Cluster: Alpha-tubulin; n=2; Eukaryota|Rep:
Alpha-tubulin - Schmidtea polychroa (Freshwater
planarian flatworm) (Dugesiapolychroa)
Length = 489
Score = 52.8 bits (121), Expect = 1e-06
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +2
Query: 2 HGIDPSGCYH-GDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFR 178
HGI G G +D N ++ ++ + +YVPR + IDL+P +D +R+G + LF
Sbjct: 28 HGITADGKMRSGLTDGDSRAFNTFFFQSPSDQYVPRVLSIDLEPTVVDEIRTGTYRQLFH 87
Query: 179 PDNFVYGQNCAA 214
PD+ + G+ AA
Sbjct: 88 PDSLINGEEDAA 99
>UniRef50_Q3ZJ98 Cluster: Tubulin gamma subunit; n=1;
Monocercomonoides sp. PA203|Rep: Tubulin gamma subunit -
Monocercomonoides sp. PA203
Length = 479
Score = 52.4 bits (120), Expect = 2e-06
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRP 181
HGI+ G ++ +R +V++ +A ++VPR VLIDL+P + +++GP F P
Sbjct: 28 HGIELDGVLKDEAAAVDDRKDVFFYQADDDRFVPRAVLIDLEPKVIGGIKNGPMKHFFNP 87
Query: 182 DNF 190
+NF
Sbjct: 88 ENF 90
>UniRef50_Q5B300 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 804
Score = 52.4 bits (120), Expect = 2e-06
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVY---YNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCL 172
HG+ G + D + R + Y + E GK+VPR++ +DL P+ +D +R+G + L
Sbjct: 500 HGLTADGHVNPDITTDIHRNDSYVTIFTELGNGKFVPRSIFVDLDPSPIDEIRTGTYRHL 559
Query: 173 FRPDNFVYGQNCAA 214
F P+ + G+ AA
Sbjct: 560 FHPEQLISGKEDAA 573
>UniRef50_Q2U1M2 Cluster: Beta tubulin; n=649; root|Rep: Beta
tubulin - Aspergillus oryzae
Length = 817
Score = 52.4 bits (120), Expect = 2e-06
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEA--SAGKYVPRTVLIDLKPATMDAVRSGPFGCLF 175
HG+D SG + G SD Q E+++VY++E YVPR +L+D K T D + +GP F
Sbjct: 420 HGLDTSGKFTG-SDYQREKLDVYFSEVITEPQNYVPRAILLDSKSDTRDRICTGPLRTFF 478
Query: 176 RPDNFVY 196
N ++
Sbjct: 479 HRRNLLF 485
>UniRef50_A4H729 Cluster: Alpha tubulin; n=5; Trypanosomatidae|Rep:
Alpha tubulin - Leishmania braziliensis
Length = 267
Score = 51.2 bits (117), Expect = 4e-06
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLE--RINVYYNEASAGKYVPRTVLIDLKPATMDAVRSG 157
HGI P G D + +E N +++E AGK+VPR++ +DL+P +D VR+G
Sbjct: 62 HGIQPDGSMPSDKCIGVEDDAFNTFFSETGAGKHVPRSLFLDLEPTVVDEVRTG 115
>UniRef50_Q24D61 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 441
Score = 50.8 bits (116), Expect = 6e-06
Identities = 22/68 (32%), Positives = 36/68 (52%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRP 181
H +DP G + SD Q E+ NVY+ E G Y R++ +D P ++ ++ LF
Sbjct: 28 HSLDPYGDLNHSSDYQKEKFNVYFLETIKGSYCARSIQVDSDPDFINEIQQSYIQNLFSQ 87
Query: 182 DNFVYGQN 205
+F+YG +
Sbjct: 88 SSFIYGNS 95
>UniRef50_P54401 Cluster: Tubulin gamma chain; n=3; Entamoeba
histolytica|Rep: Tubulin gamma chain - Entamoeba
histolytica
Length = 451
Score = 50.8 bits (116), Expect = 6e-06
Identities = 23/71 (32%), Positives = 42/71 (59%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRP 181
HGI P G + + +R +V++ +A +YVPR++ IDL+P +D++R+ + + P
Sbjct: 29 HGILPDGSLSTNEFID-DRKDVFFYQADDQRYVPRSINIDLEPRVLDSIRTSEWRNFYNP 87
Query: 182 DNFVYGQNCAA 214
+NF+ N A
Sbjct: 88 ENFIIPTNNGA 98
>UniRef50_A6RQ51 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 573
Score = 50.0 bits (114), Expect = 1e-05
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = +2
Query: 59 INVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAA 214
++ + E GKYVPR++ +DL P+ +D +R+G + LF P+ + G+ AA
Sbjct: 55 LDTVFTETGNGKYVPRSIFVDLDPSPIDEIRTGDYRSLFHPELLISGKEDAA 106
>UniRef50_P23258 Cluster: Tubulin gamma-1 chain; n=213; cellular
organisms|Rep: Tubulin gamma-1 chain - Homo sapiens
(Human)
Length = 451
Score = 50.0 bits (114), Expect = 1e-05
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRP 181
HGI P G + +R +V++ +A Y+PR VL+DL+P + ++ + P+ L+ P
Sbjct: 29 HGISPEGIVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSPYAKLYNP 88
Query: 182 DNFVYGQN 205
+N ++
Sbjct: 89 ENIYLSEH 96
>UniRef50_UPI00005A4366 Cluster: PREDICTED: similar to tubulin,
alpha 1; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to tubulin, alpha 1 - Canis familiaris
Length = 128
Score = 49.6 bits (113), Expect = 1e-05
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQL--ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLF 175
HGI +G + + + N++ +E AGK+VPR V +DLKP +D V +G + LF
Sbjct: 53 HGIQTNGRMPSNKTIAGGDDSFNIF-SETDAGKHVPRAVSVDLKPRVIDEVHNGTYHQLF 111
Query: 176 RPDNFVYGQNCAA 214
P + G+ AA
Sbjct: 112 HPQQLIAGKKDAA 124
>UniRef50_Q7R2Q0 Cluster: GLP_546_6876_8351; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_546_6876_8351 - Giardia lamblia ATCC
50803
Length = 491
Score = 48.8 bits (111), Expect = 2e-05
Identities = 20/62 (32%), Positives = 36/62 (58%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRP 181
HGI+P G ++ +R +V++ ++ YVPR +L+D +P + +R+GP L P
Sbjct: 48 HGINPDGTLRPEAYTFNDRKDVFFYQSDDEHYVPRAILLDTEPGVISHIRNGPIKELINP 107
Query: 182 DN 187
+N
Sbjct: 108 EN 109
>UniRef50_Q0D0J3 Cluster: Tubulin gamma chain; n=6; Fungi/Metazoa
group|Rep: Tubulin gamma chain - Aspergillus terreus
(strain NIH 2624)
Length = 450
Score = 47.6 bits (108), Expect = 5e-05
Identities = 15/37 (40%), Positives = 29/37 (78%)
Frame = +2
Query: 92 KYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQ 202
+Y+PR +L+DL+P +++++SGP+ ++ P+NF GQ
Sbjct: 54 RYIPRAILLDLEPRVLNSIQSGPYRNIYNPENFFIGQ 90
>UniRef50_A6RFR4 Cluster: Tubulin gamma chain; n=1; Ajellomyces
capsulatus NAm1|Rep: Tubulin gamma chain - Ajellomyces
capsulatus NAm1
Length = 655
Score = 47.6 bits (108), Expect = 5e-05
Identities = 18/67 (26%), Positives = 41/67 (61%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRP 181
HGI+ G + +R +V++ ++ +Y+PR +L+DL+P ++ +++G + ++ P
Sbjct: 266 HGINKDGNLAEFATEGGDRKDVFFYQSDDTRYIPRAILLDLEPRVLNTIQTGAYRNIYNP 325
Query: 182 DNFVYGQ 202
+NF G+
Sbjct: 326 ENFFIGR 332
>UniRef50_Q24D62 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 459
Score = 47.2 bits (107), Expect = 7e-05
Identities = 25/71 (35%), Positives = 39/71 (54%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRP 181
H +D G SD Q E+I VY++E + +Y R++LID P ++ ++ FG LF
Sbjct: 28 HQLDQDGYSDKMSDFQREQIGVYFDEQNDKRYKARSLLIDGDPNSIFQIQQSSFGNLFNS 87
Query: 182 DNFVYGQNCAA 214
+ F+ Q AA
Sbjct: 88 NCFIQDQWSAA 98
>UniRef50_A2EAH1 Cluster: Gamma tubulin, putative; n=5;
Eukaryota|Rep: Gamma tubulin, putative - Trichomonas
vaginalis G3
Length = 457
Score = 46.0 bits (104), Expect = 2e-04
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRP 181
HGI P G + +R ++++ + G+Y+PR +LIDL+P + +++ F
Sbjct: 29 HGIGPDGVLREPENTLEDRKDIFFYSSDDGRYIPRAILIDLEPRVIMGIKNSELKDFFNA 88
Query: 182 DNFVYG 199
+N G
Sbjct: 89 ENMYIG 94
>UniRef50_Q8J1W3 Cluster: Beta-tubulin; n=1; Colletotrichum
sp.|Rep: Beta-tubulin - Colletotrichum sp
Length = 80
Score = 46.0 bits (104), Expect = 2e-04
Identities = 18/28 (64%), Positives = 25/28 (89%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEAS 85
HG+D +G Y+G S+LQLER++VY+NEAS
Sbjct: 7 HGLDSNGVYNGTSELQLERMSVYFNEAS 34
>UniRef50_UPI0000E7FE1E Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 94
Score = 45.2 bits (102), Expect = 3e-04
Identities = 28/64 (43%), Positives = 33/64 (51%)
Frame = +3
Query: 3 TASIQADATTATPTCNSKGSTCTTTRHRLGNMFLARFLST*SRPRWTR*GRDPSDAYSDR 182
TAS ATTAT TC+ +GSTCTT + + + T S RWTR P D SD
Sbjct: 3 TASTPPAATTATATCSWRGSTCTTMKLPVTSTSPVPSWLTWSPARWTRCAPAPLDRSSDP 62
Query: 183 TISS 194
T S
Sbjct: 63 TTLS 66
>UniRef50_Q862L2 Cluster: Similar to alpha-tubulin isoform 1; n=1;
Bos taurus|Rep: Similar to alpha-tubulin isoform 1 - Bos
taurus (Bovine)
Length = 99
Score = 44.8 bits (101), Expect = 4e-04
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2
Query: 53 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPF 163
+ N +++E AGK+VPR V +DL+P +D VR+G +
Sbjct: 47 DSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTY 83
>UniRef50_A7M6D9 Cluster: Alpha-tubulin; n=1; Dugesia
ryukyuensis|Rep: Alpha-tubulin - Dugesia ryukyuensis
Length = 534
Score = 43.2 bits (97), Expect = 0.001
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERI--NVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLF 175
HGI+ G DS+ + + + ++ E +G +VPR + IDL+P +D +R+ + L+
Sbjct: 28 HGIEADGKLR-DSERFAQNVGFHTFFQEVPSGNFVPRAINIDLEPTVIDEIRTANYRHLW 86
Query: 176 RPDNFV 193
PD +
Sbjct: 87 HPDYLI 92
>UniRef50_Q4S6A2 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=6; Euteleostomi|Rep: Chromosome 9
SCAF14729, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 416
Score = 41.5 bits (93), Expect = 0.004
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQL--ERINVYYNEASAGKYVPRTVLIDLKPATM 139
HGI P G D L + N +++E AGK+VPR V +DL+P +
Sbjct: 29 HGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVI 76
>UniRef50_P34475 Cluster: Tubulin gamma chain; n=2;
Caenorhabditis|Rep: Tubulin gamma chain - Caenorhabditis
elegans
Length = 444
Score = 41.1 bits (92), Expect = 0.005
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGP-FGCLFR 178
HGI+ G + D+ ++ ++Y +A YVPR VL+DL+P ++ + P F LF
Sbjct: 31 HGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFN 89
Query: 179 PDN 187
DN
Sbjct: 90 TDN 92
>UniRef50_Q3SEF9 Cluster: Alpha-tubulin,putative; n=1; Paramecium
tetraurelia|Rep: Alpha-tubulin,putative - Paramecium
tetraurelia
Length = 551
Score = 40.3 bits (90), Expect = 0.008
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINV--YYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLF 175
H I P G D L+ NV ++ + G+YVPR + D P T++A+++GP LF
Sbjct: 28 HSIQPDGTVPTDRILEGLNSNVDSLFSLSQYGRYVPRAIFFDEDPTTINAIKNGPSRGLF 87
>UniRef50_A0JJL8 Cluster: Beta-tubulin; n=13; Sordariomycetes|Rep:
Beta-tubulin - Phaeoacremonium venezuelense
Length = 90
Score = 39.9 bits (89), Expect = 0.011
Identities = 25/70 (35%), Positives = 34/70 (48%)
Frame = +1
Query: 1 ARHRSKRMLPRRLRPATRKDQRVLQRGIGWEICSSHGSYRLEAGHDGRGEVGTLRMPIQT 180
AR R + L R LR R +R+LQRG+ ++ + RL A H G +LR +
Sbjct: 12 ARSRQQWRLQRHLRAPARAHERLLQRGLWQQVRAPCRPGRLGARHHGCRPCRSLRPAVPP 71
Query: 181 GQFRLRTKLC 210
Q RLR C
Sbjct: 72 RQLRLRPVWC 81
>UniRef50_A5HWB6 Cluster: Bacterial tubulin B; n=8;
Prosthecobacter|Rep: Bacterial tubulin B -
Prosthecobacter vanneervenii
Length = 442
Score = 39.5 bits (88), Expect = 0.015
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 2 HGIDPSGC-YHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLF 175
HG+ +G G + + V++++ GKY+PR +L+DL+P + + G LF
Sbjct: 46 HGLTEAGTPKEGTNVAANANMEVFFHKVRDGKYIPRAILVDLEPGVIARIEGGDMAQLF 104
>UniRef50_A5HWB9 Cluster: Bacterial tubulin A2; n=7;
Prosthecobacter|Rep: Bacterial tubulin A2 -
Prosthecobacter debontii
Length = 497
Score = 39.1 bits (87), Expect = 0.019
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYN---EASAGKYVPRTVLIDLKPATMDAVRSGPFGCL 172
HGIDP+ + +++ + S+ YVPR+V++DL+P+ ++ +++ G L
Sbjct: 30 HGIDPTTAQCKSGAAPKGNWSAFFSKLGDGSSASYVPRSVMVDLEPSVINQIKA-TTGSL 88
Query: 173 FRPDNFV 193
F P N +
Sbjct: 89 FNPANLI 95
>UniRef50_Q4UCK3 Cluster: Tubulin gamma-chain (Gamma-tubulin),
putative; n=2; Theileria|Rep: Tubulin gamma-chain
(Gamma-tubulin), putative - Theileria annulata
Length = 490
Score = 36.7 bits (81), Expect = 0.10
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRP 181
HGI+ G + + ++ +V++ + +Y PR +LIDL+P + ++ + LF P
Sbjct: 29 HGINKDGFLLDKTPIGDDK-DVFFFQTGTNRYYPRALLIDLEPRVISSILNSENKNLFNP 87
Query: 182 DN 187
+N
Sbjct: 88 EN 89
>UniRef50_Q3SEG3 Cluster: Beta tubulin,putative; n=2; Paramecium
tetraurelia|Rep: Beta tubulin,putative - Paramecium
tetraurelia
Length = 426
Score = 36.7 bits (81), Expect = 0.10
Identities = 13/36 (36%), Positives = 26/36 (72%)
Frame = +2
Query: 35 DSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMD 142
+ D ++INV++NE S +++PR + +DL+P ++D
Sbjct: 38 NQDRNRQKINVFFNENSRQQFLPRCLFLDLEPKSID 73
>UniRef50_UPI00003977B9 Cluster: hypothetical protein Haso02002277;
n=1; Haemophilus somnus 2336|Rep: hypothetical protein
Haso02002277 - Haemophilus somnus 2336
Length = 198
Score = 35.9 bits (79), Expect = 0.18
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = -1
Query: 214 GRTVLSVDEIVRSE*ASEGSRPHRVHRGRLQVDKNRARNIFPSRCL 77
G +L+ DE++R E + G+ PH + +V+KN R++ PS L
Sbjct: 80 GCILLATDELLRVEELAVGASPHLIDDSGFKVNKNSTRDVLPSTSL 125
>UniRef50_Q23WP5 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 450
Score = 35.9 bits (79), Expect = 0.18
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 HGIDPSGCY-HGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFR 178
H I+ SG ++ L+ E + ++ E+ + K P +V IDL +D +++G L++
Sbjct: 28 HKIELSGIKKQSENTLEQENLLSFFQESVSEKITPISVFIDLDTEQIDEIKNGQCRTLYK 87
Query: 179 PD 184
PD
Sbjct: 88 PD 89
>UniRef50_UPI00006CA67A Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 452
Score = 35.5 bits (78), Expect = 0.24
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 53 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYG-QNCAA 214
E + +++E+ KYVPR V +DL +D +R FR D + G ++C +
Sbjct: 45 ENVTCFFSESEKQKYVPRCVFLDLDATPIDEIRK-KSSSFFRKDCLISGKEDCGS 98
>UniRef50_A0BQ86 Cluster: Chromosome undetermined scaffold_120,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_120,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 289
Score = 35.1 bits (77), Expect = 0.31
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +2
Query: 68 YYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCA 211
+++E K+ R++ IDL T+D ++ F LFRP + G++ A
Sbjct: 100 FFSETGNNKHSQRSLFIDLDRNTIDELKRSQFRELFRPQQMILGKDSA 147
>UniRef50_Q8SRD2 Cluster: Tubulin gamma chain; n=1; Encephalitozoon
cuniculi|Rep: Tubulin gamma chain - Encephalitozoon
cuniculi
Length = 434
Score = 35.1 bits (77), Expect = 0.31
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRS 154
HGI G DL +R +V++ +A +VPR +L+DL+P + S
Sbjct: 28 HGISMCGVLQDSRDLG-DRKDVFFYQADDNVFVPRAILVDLEPRVISQAPS 77
>UniRef50_UPI0000DC0F37 Cluster: UPI0000DC0F37 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0F37 UniRef100 entry -
Rattus norvegicus
Length = 410
Score = 34.7 bits (76), Expect = 0.41
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 62 NVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPD 184
N +++E A K++P+ + I L+P +D V +G LF P+
Sbjct: 55 NTFFSETGASKHLPQAMFIGLEPTVIDEVCTGICCQLFHPE 95
>UniRef50_Q2A9A4 Cluster: Putative uncharacterized protein; n=2;
Brassica oleracea|Rep: Putative uncharacterized protein
- Brassica oleracea (Wild cabbage)
Length = 237
Score = 33.9 bits (74), Expect = 0.72
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = -1
Query: 202 LSVDEIVRSE*ASEGSRPHRVHRGRLQVDKNRARNIFPSRCLVVVHVDPFELQVGVAVV 26
LS DEI + G+RP R R R + + IFP CLV ++ D F + A V
Sbjct: 163 LSRDEIEEDVFSMSGNRPSRRPRKRTKTLQKHLDVIFPGLCLVGMNADCFRVSTSPAKV 221
>UniRef50_Q3SEH6 Cluster: Iota_tubulin,putative; n=2; Paramecium
tetraurelia|Rep: Iota_tubulin,putative - Paramecium
tetraurelia
Length = 408
Score = 33.9 bits (74), Expect = 0.72
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 92 KYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQN 205
K +PRT+L+D + T+D +R + P+NFV G++
Sbjct: 39 KGIPRTILVDNEENTLDKIRGNKNLSYYDPNNFVCGKS 76
>UniRef50_Q4S633 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 404
Score = 33.1 bits (72), Expect = 1.3
Identities = 10/29 (34%), Positives = 22/29 (75%)
Frame = +2
Query: 53 ERINVYYNEASAGKYVPRTVLIDLKPATM 139
++ N +++ S+G++VPR V +DL+P+ +
Sbjct: 49 DQFNTFFHTGSSGRHVPRAVYVDLEPSVV 77
>UniRef50_UPI0000EB04B1 Cluster: UPI0000EB04B1 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB04B1 UniRef100
entry - Canis familiaris
Length = 387
Score = 32.7 bits (71), Expect = 1.7
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 53 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCA 211
+ N ++E AGK+VPR + + P +D V +G LF P+ G+ A
Sbjct: 48 DSFNASFSEMGAGKHVPRAMFV---PTVIDEVHTGTDCQLFHPEQLNTGKEDA 97
>UniRef50_Q585R2 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 1537
Score = 32.7 bits (71), Expect = 1.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 23 CYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPA 133
C+ S LQL ++ YY +AS + VP +VL L A
Sbjct: 856 CFFFQSALQLSEVSPYYRDASTSEEVPYSVLAPLNTA 892
>UniRef50_Q22CD2 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 443
Score = 32.7 bits (71), Expect = 1.7
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +2
Query: 68 YYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQN 205
+++E +G++VPR+V +DL ++D V+ G LF + F+ +N
Sbjct: 49 FFSETQSGQFVPRSVYLDLDSNSIDEVKVGSQKQLFNHE-FLVSKN 93
>UniRef50_Q9K3T7 Cluster: Putative membrane protein; n=2;
Streptomyces|Rep: Putative membrane protein -
Streptomyces coelicolor
Length = 172
Score = 31.9 bits (69), Expect = 2.9
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2
Query: 104 RTVLIDLKPATMDAVRSGPFGCLF 175
RT + LKP + DAVRSGP G L+
Sbjct: 105 RTYSVVLKPGSADAVRSGPAGVLY 128
>UniRef50_A5EBQ4 Cluster: Putative N-hydroxyarylamine
O-acetyltransferase; n=4; Bradyrhizobium|Rep: Putative
N-hydroxyarylamine O-acetyltransferase - Bradyrhizobium
sp. (strain BTAi1 / ATCC BAA-1182)
Length = 271
Score = 31.9 bits (69), Expect = 2.9
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 82 IGWEICSSHGSYRLEAGHDGRGEVGTLRMPIQTGQFRLRTK 204
+G+ IC G RLE G + R +GT R+ + G + + K
Sbjct: 127 VGFGICMMDGPIRLEVGPEQRTPMGTFRIGMWNGLYTISAK 167
>UniRef50_O44453 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 344
Score = 31.9 bits (69), Expect = 2.9
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -1
Query: 208 TVLSVDEIVRSE*ASEGSRPHRVHRGRLQVDKNRARNIFPSRCLVVVHV 62
T++S DEIV E E S VH+ ++ +D R RN RCL++ V
Sbjct: 231 TLISADEIVHHESTDEKSPLKIVHKSKIMLDIRR-RNDAIRRCLLLATV 278
>UniRef50_A0EC94 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_89,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 624
Score = 31.9 bits (69), Expect = 2.9
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +2
Query: 2 HGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGP 160
HGI P G +LQ V ++E+ VPR D P T++++ GP
Sbjct: 28 HGIQPDGSAPSSQNLQ-----VLFSESQTKANVPRAAFFDDDPLTINSLNRGP 75
>UniRef50_Q22UN3 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 431
Score = 31.5 bits (68), Expect = 3.9
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 59 INVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFR 178
INVY+ E Y PR+++ DL ++ V++G LF+
Sbjct: 44 INVYFEEVKQDVYKPRSIIADLDDQEINRVQNGFLKRLFQ 83
>UniRef50_Q0HHZ2 Cluster: DNA polymerase III, subunits gamma and
tau; n=2; Shewanella|Rep: DNA polymerase III, subunits
gamma and tau - Shewanella sp. (strain MR-4)
Length = 1071
Score = 31.1 bits (67), Expect = 5.1
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 53 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSG 157
+ +N N+A A K P T +D +PA +AV+SG
Sbjct: 390 QAVNRVENQAEAEKKTPLTSTVDSQPAATEAVQSG 424
>UniRef50_A1FVI0 Cluster: SNF2-related; n=1; Stenotrophomonas
maltophilia R551-3|Rep: SNF2-related - Stenotrophomonas
maltophilia R551-3
Length = 1104
Score = 31.1 bits (67), Expect = 5.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 61 QRVLQRGIGWEICSSHGSYRLEAGHDGRGEVG 156
Q ++ G GW C +HG +G RGE+G
Sbjct: 215 QLIVSSGHGWVSCGTHGDVPARSGAPRRGELG 246
>UniRef50_UPI00006CBC09 Cluster: hydrolase, alpha/beta fold family
protein; n=1; Tetrahymena thermophila SB210|Rep:
hydrolase, alpha/beta fold family protein - Tetrahymena
thermophila SB210
Length = 291
Score = 30.7 bits (66), Expect = 6.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 26 YHGDSDLQLERINVYYNEASAGKYVPRTVLIDL 124
YHG D+ + N YN + KY P+T L L
Sbjct: 224 YHGTEDIVITYDNAVYNYQTLAKYNPKTYLFTL 256
>UniRef50_A3LPM8 Cluster: Mannosyltransferase; n=4;
Saccharomycetales|Rep: Mannosyltransferase - Pichia
stipitis (Yeast)
Length = 561
Score = 30.7 bits (66), Expect = 6.7
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 55 KDQRVLQRGIGWEICSSHGSYRLEAGHDGRGEVGTLRMPIQT 180
KD +++ +GW+I H R + HDG G + M +++
Sbjct: 499 KDNGIIKANLGWDILKCHKLLRPDGHHDGIGRFIYIPMSLRS 540
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,706,063
Number of Sequences: 1657284
Number of extensions: 3973170
Number of successful extensions: 12796
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 12349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12787
length of database: 575,637,011
effective HSP length: 49
effective length of database: 494,430,095
effective search space used: 10383031995
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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