Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23b01
         (429 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071484-1|AAL49106.1|  241|Drosophila melanogaster RE55344p pro...    59   3e-09
AE014296-1468|AAF50406.1|  241|Drosophila melanogaster CG6776-PA...    59   3e-09
AY070667-1|AAL48138.1|  243|Drosophila melanogaster RH04924p pro...    54   6e-08
AE014296-1469|AAF50405.1|  243|Drosophila melanogaster CG6781-PA...    54   6e-08
AY071499-1|AAL49121.1|  254|Drosophila melanogaster RE55814p pro...    52   2e-07
AE014296-1472|AAF50402.1|  254|Drosophila melanogaster CG6662-PA...    52   2e-07
AY061342-1|AAL28890.2|  267|Drosophila melanogaster LD27185p pro...    52   4e-07
AE014296-1471|AAF50403.2|  250|Drosophila melanogaster CG6673-PB...    50   1e-06
BT024242-1|ABC86304.1|  266|Drosophila melanogaster IP16242p pro...    42   5e-04
AE014296-1470|AAF50404.2|  251|Drosophila melanogaster CG6673-PA...    40   0.001
BT022319-1|AAY54735.1|  221|Drosophila melanogaster IP08243p pro...    28   6.1  
AE013599-2679|AAF57698.1|  222|Drosophila melanogaster CG17525-P...    28   6.1  

>AY071484-1|AAL49106.1|  241|Drosophila melanogaster RE55344p
           protein.
          Length = 241

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 28/50 (56%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
 Frame = +1

Query: 217 SEKHLQTGDVLP--PYSGKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFI 360
           S KHL  G   P  P  G LR+++MRFCPYA+R  L LNAKN+PY  V+I
Sbjct: 3   SGKHLAKGSPKPVLPDDGVLRLYSMRFCPYAQRAHLVLNAKNVPYHSVYI 52



 Score = 27.9 bits (59), Expect = 6.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 362 NLDQKPEWIFNFSPKGTVPXLE 427
           NL +KPEW+   SP   VP L+
Sbjct: 53  NLTEKPEWLVEVSPLLKVPALQ 74


>AE014296-1468|AAF50406.1|  241|Drosophila melanogaster CG6776-PA
           protein.
          Length = 241

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 28/50 (56%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
 Frame = +1

Query: 217 SEKHLQTGDVLP--PYSGKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFI 360
           S KHL  G   P  P  G LR+++MRFCPYA+R  L LNAKN+PY  V+I
Sbjct: 3   SGKHLAKGSPKPVLPDDGVLRLYSMRFCPYAQRAHLVLNAKNVPYHSVYI 52



 Score = 27.9 bits (59), Expect = 6.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 362 NLDQKPEWIFNFSPKGTVPXLE 427
           NL +KPEW+   SP   VP L+
Sbjct: 53  NLTEKPEWLVEVSPLLKVPALQ 74


>AY070667-1|AAL48138.1|  243|Drosophila melanogaster RH04924p
           protein.
          Length = 243

 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
 Frame = +1

Query: 223 KHLQTGDVLP--PYSGKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFIKFRSET*MDLQL 396
           +HL  G  +P  P  G LR+++MRFCP+A+R  L L+AK IPY  ++I    +    L+ 
Sbjct: 5   RHLAKGSPMPDVPEDGILRLYSMRFCPFAQRVHLVLDAKQIPYHSIYINLTDKPEWLLEK 64

Query: 397 *PEG 408
            P+G
Sbjct: 65  NPQG 68



 Score = 31.9 bits (69), Expect = 0.37
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 362 NLDQKPEWIFNFSPKGTVPXLE 427
           NL  KPEW+   +P+G VP LE
Sbjct: 53  NLTDKPEWLLEKNPQGKVPALE 74


>AE014296-1469|AAF50405.1|  243|Drosophila melanogaster CG6781-PA
           protein.
          Length = 243

 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
 Frame = +1

Query: 223 KHLQTGDVLP--PYSGKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFIKFRSET*MDLQL 396
           +HL  G  +P  P  G LR+++MRFCP+A+R  L L+AK IPY  ++I    +    L+ 
Sbjct: 5   RHLAKGSPMPDVPEDGILRLYSMRFCPFAQRVHLVLDAKQIPYHSIYINLTDKPEWLLEK 64

Query: 397 *PEG 408
            P+G
Sbjct: 65  NPQG 68



 Score = 31.9 bits (69), Expect = 0.37
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 362 NLDQKPEWIFNFSPKGTVPXLE 427
           NL  KPEW+   +P+G VP LE
Sbjct: 53  NLTDKPEWLLEKNPQGKVPALE 74


>AY071499-1|AAL49121.1|  254|Drosophila melanogaster RE55814p
           protein.
          Length = 254

 Score = 52.4 bits (120), Expect = 2e-07
 Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
 Frame = +1

Query: 223 KHLQTGDVLP--PYSGKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFIKFRSE 375
           +HL  G   P  P  G L++++MRFCPYA R  L L+AK IPY  ++I  R +
Sbjct: 5   QHLTIGSPKPVFPDDGILKLYSMRFCPYAHRVHLVLDAKKIPYHAIYINLRDK 57


>AE014296-1472|AAF50402.1|  254|Drosophila melanogaster CG6662-PA
           protein.
          Length = 254

 Score = 52.4 bits (120), Expect = 2e-07
 Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
 Frame = +1

Query: 223 KHLQTGDVLP--PYSGKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFIKFRSE 375
           +HL  G   P  P  G L++++MRFCPYA R  L L+AK IPY  ++I  R +
Sbjct: 5   QHLTIGSPKPVFPDDGILKLYSMRFCPYAHRVHLVLDAKKIPYHAIYINLRDK 57


>AY061342-1|AAL28890.2|  267|Drosophila melanogaster LD27185p
           protein.
          Length = 267

 Score = 51.6 bits (118), Expect = 4e-07
 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
 Frame = +1

Query: 193 KKVTSFNMSEKHLQTGDVLP--PYSGKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFI 360
           K V    + +KH + G   P  P  G LR ++MRFCPY++R  L L AK IP+  V+I
Sbjct: 13  KIVNKMALPQKHFKRGSPKPEIPEDGVLRYYSMRFCPYSQRAGLVLAAKKIPHHTVYI 70



 Score = 30.7 bits (66), Expect = 0.87
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +2

Query: 362 NLDQKPEWIFNFSPKGTVPXLE 427
           +L +KPEW  ++SP G VP ++
Sbjct: 71  DLSEKPEWYIDYSPLGKVPAIQ 92


>AE014296-1471|AAF50403.2|  250|Drosophila melanogaster CG6673-PB,
           isoform B protein.
          Length = 250

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
 Frame = +1

Query: 214 MSEKHLQTGDVLP--PYSGKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFI 360
           + +KH + G   P  P  G LR ++MRFCPY++R  L L AK IP+  V+I
Sbjct: 3   LPQKHFKRGSPKPEIPEDGVLRYYSMRFCPYSQRAGLVLAAKKIPHHTVYI 53



 Score = 30.7 bits (66), Expect = 0.87
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +2

Query: 362 NLDQKPEWIFNFSPKGTVPXLE 427
           +L +KPEW  ++SP G VP ++
Sbjct: 54  DLSEKPEWYIDYSPLGKVPAIQ 75


>BT024242-1|ABC86304.1|  266|Drosophila melanogaster IP16242p
           protein.
          Length = 266

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
 Frame = +1

Query: 193 KKVTSFNMSEKHLQTGDVLP--PYSGKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFI 360
           K V    + +KH + G   P  P  G  R F+M FCP++ R  L L AK+I +  +++
Sbjct: 11  KIVNKMALPQKHFKRGSTKPELPEDGVPRFFSMAFCPFSHRVRLMLAAKHIEHHKIYV 68



 Score = 30.3 bits (65), Expect = 1.1
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 362 NLDQKPEWIFNFSPKGTVPXLE 427
           +L +KPEW  +FSP G VP L+
Sbjct: 69  DLIEKPEWYKDFSPLGKVPALQ 90


>AE014296-1470|AAF50404.2|  251|Drosophila melanogaster CG6673-PA,
           isoform A protein.
          Length = 251

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
 Frame = +1

Query: 214 MSEKHLQTGDVLP--PYSGKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFI 360
           + +KH + G   P  P  G  R F+M FCP++ R  L L AK+I +  +++
Sbjct: 3   LPQKHFKRGSTKPELPEDGVPRFFSMAFCPFSHRVRLMLAAKHIEHHKIYV 53



 Score = 30.3 bits (65), Expect = 1.1
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 362 NLDQKPEWIFNFSPKGTVPXLE 427
           +L +KPEW  +FSP G VP L+
Sbjct: 54  DLIEKPEWYKDFSPLGKVPALQ 75


>BT022319-1|AAY54735.1|  221|Drosophila melanogaster IP08243p
           protein.
          Length = 221

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +1

Query: 262 GKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFI 360
           GK+ ++ +   P     +LTL A ++P++ VF+
Sbjct: 1   GKISLYGLDASPPTRACLLTLKALDLPFEFVFV 33


>AE013599-2679|AAF57698.1|  222|Drosophila melanogaster CG17525-PA
           protein.
          Length = 222

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +1

Query: 262 GKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFI 360
           GK+ ++ +   P     +LTL A ++P++ VF+
Sbjct: 2   GKISLYGLDASPPTRACLLTLKALDLPFEFVFV 34


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,332,315
Number of Sequences: 53049
Number of extensions: 284548
Number of successful extensions: 385
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 385
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1334434944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)