Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23a22
         (431 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77664-1|CAB01216.2|  900|Caenorhabditis elegans Hypothetical pr...    28   2.5  
Z81553-6|CAB04495.1|  388|Caenorhabditis elegans Hypothetical pr...    28   3.3  
Z75554-1|CAA99953.3|  681|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>Z77664-1|CAB01216.2|  900|Caenorhabditis elegans Hypothetical
           protein F53H10.2 protein.
          Length = 900

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -3

Query: 423 LLKHFIYKSYQYNFPDNNRSILSSPRPVKFAIGTSLFIRSISNRYLP 283
           LLK  ++K   +N P    SI++    ++   GT L I ++    LP
Sbjct: 265 LLKQHLHKKSHHNVPSRKASIMALKSQLRTPRGTPLNISTVPGTELP 311


>Z81553-6|CAB04495.1|  388|Caenorhabditis elegans Hypothetical
           protein F56H6.6 protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -1

Query: 230 EESVKLKIIFIRMRFGSSFCFDFHINFWTI-HKI 132
           E+ + L++  ++M F +   F+FH NF+ I HKI
Sbjct: 229 EDEIPLEVEQLKMGFENQKVFEFHHNFFFIGHKI 262


>Z75554-1|CAA99953.3|  681|Caenorhabditis elegans Hypothetical
           protein ZC455.1 protein.
          Length = 681

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 363 ILSSPRPVKFAIGTSLFIRSISNRYLPPRYMDTMMAPTKS 244
           I++SP P+    G SLF  ++  R   P Y  T+M  +K+
Sbjct: 347 IITSPHPI-LTKGKSLFYNAVLPRQSLPDYPVTLMVSSKT 385


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,505,781
Number of Sequences: 27780
Number of extensions: 182239
Number of successful extensions: 415
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 415
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)