Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23a21
         (597 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC093077-1|AAH93077.1|  169|Homo sapiens COMMD2 protein protein.       59   1e-08
BC046131-1|AAH46131.1|  199|Homo sapiens COMM domain containing ...    59   1e-08
AY542158-1|AAS22240.1|  199|Homo sapiens COMMD2 protein.               59   1e-08
AF059618-1|AAG43117.1|  199|Homo sapiens My004 protein protein.        59   1e-08
BC022046-1|AAH22046.1|  190|Homo sapiens copper metabolism (Murr...    31   2.3  
BC009266-1|AAH09266.2|  186|Homo sapiens COMMD1 protein protein.       31   2.3  
AK223607-1|BAD97327.1|  190|Homo sapiens MURR1 variant protein.        31   2.3  
AC116652-1|AAY24054.1|   94|Homo sapiens unknown protein.              31   2.3  
AB178811-1|BAD18972.1|  190|Homo sapiens MURR1 protein.                31   2.3  
X87904-1|CAB57277.1| 2135|Homo sapiens semaphorin receptor protein.    30   7.2  
BC146793-1|AAI46794.1| 2135|Homo sapiens plexin B1 protein.            30   7.2  
BC035325-1|AAH35325.1|  597|Homo sapiens UTP6, small subunit (SS...    30   7.2  
BC015454-1|AAH15454.1|  593|Homo sapiens UTP6 protein protein.         30   7.2  
AJ011415-1|CAB56222.1| 1952|Homo sapiens plexin-B1/SEP receptor ...    30   7.2  
AF334386-1|AAO15382.1|  597|Homo sapiens multiple hat domains pr...    30   7.2  
AF244135-1|AAF66244.1|  597|Homo sapiens hepatocellular carcinom...    30   7.2  
AB007867-1|BAA23703.2| 2143|Homo sapiens KIAA0407 protein.             30   7.2  

>BC093077-1|AAH93077.1|  169|Homo sapiens COMMD2 protein protein.
          Length = 169

 Score = 58.8 bits (136), Expect = 1e-08
 Identities = 28/74 (37%), Positives = 45/74 (60%)
 Frame = +1

Query: 322 LSESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWRFEVQIA 501
           +SE DF+ S+ + GFS +   ++ +LY   +KE+   L  L  + P Y +  WR +VQ+A
Sbjct: 77  ISELDFQDSVFVLGFSEELNKLLLQLYLDNRKEIRTLLSELAPSLPSYHNLEWRLDVQLA 136

Query: 502 SRNSNEGIKPVVTM 543
           SR+  + IKP VT+
Sbjct: 137 SRSLRQQIKPAVTI 150



 Score = 54.0 bits (124), Expect = 4e-07
 Identities = 27/71 (38%), Positives = 44/71 (61%)
 Frame = +3

Query: 105 MIIFLTELQKDHLKLLHEHSVQVLIDFCKLAVEYINKGANSNKYGIAAEKLKVPLATIRN 284
           M++ L+E  K+HL  L +    V+ +F ++AVE++ +GAN   Y  AA KL V   T+++
Sbjct: 1   MLLELSEEHKEHLAFLPQVDSAVVAEFGRIAVEFLRRGANPKIYEGAARKLNVSSDTVQH 60

Query: 285 LVQALVYLILE 317
            V+ L YL+ E
Sbjct: 61  GVEGLTYLLTE 71


>BC046131-1|AAH46131.1|  199|Homo sapiens COMM domain containing 2
           protein.
          Length = 199

 Score = 58.8 bits (136), Expect = 1e-08
 Identities = 28/74 (37%), Positives = 45/74 (60%)
 Frame = +1

Query: 322 LSESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWRFEVQIA 501
           +SE DF+ S+ + GFS +   ++ +LY   +KE+   L  L  + P Y +  WR +VQ+A
Sbjct: 77  ISELDFQDSVFVLGFSEELNKLLLQLYLDNRKEIRTLLSELAPSLPSYHNLEWRLDVQLA 136

Query: 502 SRNSNEGIKPVVTM 543
           SR+  + IKP VT+
Sbjct: 137 SRSLRQQIKPAVTI 150



 Score = 54.0 bits (124), Expect = 4e-07
 Identities = 27/71 (38%), Positives = 44/71 (61%)
 Frame = +3

Query: 105 MIIFLTELQKDHLKLLHEHSVQVLIDFCKLAVEYINKGANSNKYGIAAEKLKVPLATIRN 284
           M++ L+E  K+HL  L +    V+ +F ++AVE++ +GAN   Y  AA KL V   T+++
Sbjct: 1   MLLELSEEHKEHLAFLPQVDSAVVAEFGRIAVEFLRRGANPKIYEGAARKLNVSSDTVQH 60

Query: 285 LVQALVYLILE 317
            V+ L YL+ E
Sbjct: 61  GVEGLTYLLTE 71


>AY542158-1|AAS22240.1|  199|Homo sapiens COMMD2 protein.
          Length = 199

 Score = 58.8 bits (136), Expect = 1e-08
 Identities = 28/74 (37%), Positives = 45/74 (60%)
 Frame = +1

Query: 322 LSESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWRFEVQIA 501
           +SE DF+ S+ + GFS +   ++ +LY   +KE+   L  L  + P Y +  WR +VQ+A
Sbjct: 77  ISELDFQDSVFVLGFSEELNKLLLQLYLDNRKEIRTLLSELAPSLPSYHNLEWRLDVQLA 136

Query: 502 SRNSNEGIKPVVTM 543
           SR+  + IKP VT+
Sbjct: 137 SRSLRQQIKPAVTI 150



 Score = 54.0 bits (124), Expect = 4e-07
 Identities = 27/71 (38%), Positives = 44/71 (61%)
 Frame = +3

Query: 105 MIIFLTELQKDHLKLLHEHSVQVLIDFCKLAVEYINKGANSNKYGIAAEKLKVPLATIRN 284
           M++ L+E  K+HL  L +    V+ +F ++AVE++ +GAN   Y  AA KL V   T+++
Sbjct: 1   MLLELSEEHKEHLAFLPQVDSAVVAEFGRIAVEFLRRGANPKIYEGAARKLNVSSDTVQH 60

Query: 285 LVQALVYLILE 317
            V+ L YL+ E
Sbjct: 61  GVEGLTYLLTE 71


>AF059618-1|AAG43117.1|  199|Homo sapiens My004 protein protein.
          Length = 199

 Score = 58.8 bits (136), Expect = 1e-08
 Identities = 28/74 (37%), Positives = 45/74 (60%)
 Frame = +1

Query: 322 LSESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWRFEVQIA 501
           +SE DF+ S+ + GFS +   ++ +LY   +KE+   L  L  + P Y +  WR +VQ+A
Sbjct: 77  ISELDFQDSVFVLGFSEELNKLLLQLYLDNRKEIRTILSELAPSLPSYHNLEWRLDVQLA 136

Query: 502 SRNSNEGIKPVVTM 543
           SR+  + IKP VT+
Sbjct: 137 SRSLRQQIKPAVTI 150



 Score = 54.0 bits (124), Expect = 4e-07
 Identities = 27/71 (38%), Positives = 44/71 (61%)
 Frame = +3

Query: 105 MIIFLTELQKDHLKLLHEHSVQVLIDFCKLAVEYINKGANSNKYGIAAEKLKVPLATIRN 284
           M++ L+E  K+HL  L +    V+ +F ++AVE++ +GAN   Y  AA KL V   T+++
Sbjct: 1   MLLELSEEHKEHLAFLPQVDSAVVAEFGRIAVEFLRRGANPKIYEGAARKLNVSSDTVQH 60

Query: 285 LVQALVYLILE 317
            V+ L YL+ E
Sbjct: 61  GVEGLTYLLTE 71


>BC022046-1|AAH22046.1|  190|Homo sapiens copper metabolism (Murr1)
           domain containing 1 protein.
          Length = 190

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 17/62 (27%), Positives = 33/62 (53%)
 Frame = +1

Query: 361 GFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWRFEVQIASRNSNEGIKPVVT 540
           G ++DQ  V+SK + + K ++ E+L    R +      +WR + +  SR+S +   PV  
Sbjct: 85  GITSDQAAVISKFWKSHKTKIRESLMNQSRWNSGLRGLSWRVDGKSQSRHSAQIHTPVAI 144

Query: 541 MD 546
           ++
Sbjct: 145 IE 146


>BC009266-1|AAH09266.2|  186|Homo sapiens COMMD1 protein protein.
          Length = 186

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 17/62 (27%), Positives = 33/62 (53%)
 Frame = +1

Query: 361 GFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWRFEVQIASRNSNEGIKPVVT 540
           G ++DQ  V+SK + + K ++ E+L    R +      +WR + +  SR+S +   PV  
Sbjct: 81  GITSDQAAVISKFWKSHKTKIRESLMNQSRWNSGLRGLSWRVDGKSQSRHSAQIHTPVAI 140

Query: 541 MD 546
           ++
Sbjct: 141 IE 142


>AK223607-1|BAD97327.1|  190|Homo sapiens MURR1 variant protein.
          Length = 190

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 17/62 (27%), Positives = 33/62 (53%)
 Frame = +1

Query: 361 GFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWRFEVQIASRNSNEGIKPVVT 540
           G ++DQ  V+SK + + K ++ E+L    R +      +WR + +  SR+S +   PV  
Sbjct: 85  GITSDQAAVISKFWKSHKTKIRESLMNQSRWNSGLRGLSWRVDGKSQSRHSAQIHTPVAI 144

Query: 541 MD 546
           ++
Sbjct: 145 IE 146


>AC116652-1|AAY24054.1|   94|Homo sapiens unknown protein.
          Length = 94

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 17/62 (27%), Positives = 33/62 (53%)
 Frame = +1

Query: 361 GFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWRFEVQIASRNSNEGIKPVVT 540
           G ++DQ  V+SK + + K ++ E+L    R +      +WR + +  SR+S +   PV  
Sbjct: 25  GITSDQAAVISKFWKSHKTKIRESLMNQSRWNSGLRGLSWRVDGKSQSRHSAQIHTPVAI 84

Query: 541 MD 546
           ++
Sbjct: 85  IE 86


>AB178811-1|BAD18972.1|  190|Homo sapiens MURR1 protein.
          Length = 190

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 17/62 (27%), Positives = 33/62 (53%)
 Frame = +1

Query: 361 GFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWRFEVQIASRNSNEGIKPVVT 540
           G ++DQ  V+SK + + K ++ E+L    R +      +WR + +  SR+S +   PV  
Sbjct: 85  GITSDQAAVISKFWKSHKTKIRESLMNQSRWNSGLRGLSWRVDGKSQSRHSAQIHTPVAI 144

Query: 541 MD 546
           ++
Sbjct: 145 IE 146


>X87904-1|CAB57277.1| 2135|Homo sapiens semaphorin receptor protein.
          Length = 2135

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 382  DVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWR 483
            D +S+       +LY+ + L QR DP+ +D  WR
Sbjct: 1775 DTISQAKEKMLDQLYKGVPLTQRPDPRTLDVEWR 1808


>BC146793-1|AAI46794.1| 2135|Homo sapiens plexin B1 protein.
          Length = 2135

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 382  DVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWR 483
            D +S+       +LY+ + L QR DP+ +D  WR
Sbjct: 1775 DTISQAKEKMLDQLYKGVPLTQRPDPRTLDVEWR 1808


>BC035325-1|AAH35325.1|  597|Homo sapiens UTP6, small subunit (SSU)
           processome component, homolog (yeast) protein.
          Length = 597

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 412 KKELYEALQLLQRNDPKYIDFAWRFEVQIASRNSNE 519
           +KE+Y+ LQ L  +DP   D+  R E++I S+   +
Sbjct: 256 QKEIYDDLQALHTDDPLTWDYVARRELEIESQTEEQ 291


>BC015454-1|AAH15454.1|  593|Homo sapiens UTP6 protein protein.
          Length = 593

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 412 KKELYEALQLLQRNDPKYIDFAWRFEVQIASRNSNE 519
           +KE+Y+ LQ L  +DP   D+  R E++I S+   +
Sbjct: 252 QKEIYDDLQALHTDDPLTWDYVARRELEIESQTEEQ 287


>AJ011415-1|CAB56222.1| 1952|Homo sapiens plexin-B1/SEP receptor
            protein.
          Length = 1952

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 382  DVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWR 483
            D +S+       +LY+ + L QR DP+ +D  WR
Sbjct: 1592 DTISQAKEKMLDQLYKGVPLTQRPDPRTLDVEWR 1625


>AF334386-1|AAO15382.1|  597|Homo sapiens multiple hat domains
           protein.
          Length = 597

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 412 KKELYEALQLLQRNDPKYIDFAWRFEVQIASRNSNE 519
           +KE+Y+ LQ L  +DP   D+  R E++I S+   +
Sbjct: 256 QKEIYDDLQALHTDDPLTWDYVARRELEIESQTEEQ 291


>AF244135-1|AAF66244.1|  597|Homo sapiens hepatocellular
           carcinoma-associated antigen 66 protein.
          Length = 597

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 412 KKELYEALQLLQRNDPKYIDFAWRFEVQIASRNSNE 519
           +KE+Y+ LQ L  +DP   D+  R E++I S+   +
Sbjct: 256 QKEIYDDLQALHTDDPLTWDYVARRELEIESQTEEQ 291


>AB007867-1|BAA23703.2| 2143|Homo sapiens KIAA0407 protein.
          Length = 2143

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 382  DVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWR 483
            D +S+       +LY+ + L QR DP+ +D  WR
Sbjct: 1783 DTISQAKEKMLDQLYKGVPLTQRPDPRTLDVEWR 1816


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,891,947
Number of Sequences: 237096
Number of extensions: 1565422
Number of successful extensions: 3157
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3157
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)