Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23a21
         (597 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    23   1.7  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    23   1.7  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    23   1.7  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   1.7  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   5.3  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.2  

>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 187 ANWLWNTLIR 216
           +NW WNTL+R
Sbjct: 24  SNWNWNTLLR 33


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 187 ANWLWNTLIR 216
           +NW WNTL+R
Sbjct: 68  SNWNWNTLLR 77


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 187 ANWLWNTLIR 216
           +NW WNTL+R
Sbjct: 68  SNWNWNTLLR 77


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 187 ANWLWNTLIR 216
           +NW WNTL+R
Sbjct: 68  SNWNWNTLLR 77


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 117 LTELQKDHLKLLHEHSVQVLID 182
           L ELQ D+ + LH++S   L D
Sbjct: 109 LRELQTDYDRRLHDNSPSFLSD 130


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 241 IPYLFELAPLLMYSTANLQKS 179
           +P L+E+ P   +++  LQK+
Sbjct: 159 LPPLYEMCPYFFFNSEVLQKA 179


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 241 IPYLFELAPLLMYSTANLQKS 179
           +P L+E+ P   +++  LQK+
Sbjct: 159 LPPLYEMCPYFFFNSEVLQKA 179


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,238
Number of Sequences: 438
Number of extensions: 2972
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)