Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23a17
(508 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X76114-1|CAA53720.1| 290|Caenorhabditis elegans Oxoglutarate/ma... 62 2e-10
U23525-8|AAC46570.1| 290|Caenorhabditis elegans Hypothetical pr... 62 2e-10
Z68160-3|CAA92291.1| 269|Caenorhabditis elegans Hypothetical pr... 33 0.12
CU457741-10|CAM36351.1| 313|Caenorhabditis elegans Hypothetical... 29 1.9
Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z66511-3|CAC42276.1| 712|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z66511-2|CAA91315.1| 725|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z68336-3|CAA92735.1| 710|Caenorhabditis elegans Hypothetical pr... 27 7.8
>X76114-1|CAA53720.1| 290|Caenorhabditis elegans
Oxoglutarate/malate carrier protein protein.
Length = 290
Score = 62.1 bits (144), Expect = 2e-10
Identities = 28/46 (60%), Positives = 33/46 (71%)
Frame = -3
Query: 140 AIATTMTQPVDVLKTRAMNAKPGEIKSILSLVKNTAKESPLAFFKG 3
++AT MTQP+DV+KTR MNA PGE K IL TAK P+ FFKG
Sbjct: 211 SVATVMTQPLDVMKTRMMNAAPGEFKGILDCFMFTAKLGPMGFFKG 256
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -3
Query: 161 YLKPLQGAIATTMTQPVDVLKTRAMNAKPGEIKSILSLVKNTAKESPLAFFKG 3
Y + GA+A T P+D+LK + + G++ +K + LAF+ G
Sbjct: 13 YFGGVAGAMAACCTHPLDLLKVQLQTQQQGKLTIGQLSLKIYKNDGILAFYNG 65
>U23525-8|AAC46570.1| 290|Caenorhabditis elegans Hypothetical
protein K11G12.5 protein.
Length = 290
Score = 62.1 bits (144), Expect = 2e-10
Identities = 28/46 (60%), Positives = 33/46 (71%)
Frame = -3
Query: 140 AIATTMTQPVDVLKTRAMNAKPGEIKSILSLVKNTAKESPLAFFKG 3
++AT MTQP+DV+KTR MNA PGE K IL TAK P+ FFKG
Sbjct: 211 SVATVMTQPLDVMKTRMMNAAPGEFKGILDCFMFTAKLGPMGFFKG 256
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -3
Query: 161 YLKPLQGAIATTMTQPVDVLKTRAMNAKPGEIKSILSLVKNTAKESPLAFFKG 3
Y + GA+A T P+D+LK + + G++ +K + LAF+ G
Sbjct: 13 YFGGVAGAMAACCTHPLDLLKVQLQTQQQGKLTIGQLSLKIYKNDGILAFYNG 65
>Z68160-3|CAA92291.1| 269|Caenorhabditis elegans Hypothetical
protein D1046.3 protein.
Length = 269
Score = 33.1 bits (72), Expect = 0.12
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -3
Query: 143 GAIATTMTQPVDVLKTRAMNAKPGEIKSILSLVK 42
G IA +T P+DV KTR M K G ILS +K
Sbjct: 192 GFIAAGLTTPLDVAKTRIMLTKNGPAPGILSTLK 225
>CU457741-10|CAM36351.1| 313|Caenorhabditis elegans Hypothetical
protein C42C1.10 protein.
Length = 313
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = -3
Query: 149 LQGAIATTMTQPVDVLKTRAMNAKPGE--IKSILSLVKNT-AKESPLAFFKG 3
L G +A T P+DV++TR + K G + VK+ KE +F+G
Sbjct: 128 LSGCLAMTAAMPLDVIRTRLVAQKAGHAVYTGTMHAVKHIWEKEGIAGYFRG 179
>Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical
protein F17E5.2 protein.
Length = 531
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 143 GAIATTMTQPVDVLKTRAMNAKPGEI-KSILSLV-KNTAKESPLAFFKG 3
GAI+ T P++V+KTR + G++ K + K KE F+KG
Sbjct: 351 GAISQTAIYPMEVMKTRLALRRTGQLDKGMFHFAHKMYTKEGIKCFYKG 399
>Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical
protein K11H3.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -3
Query: 143 GAIATTMTQPVDVLKTRAMNAKPGEIKSILSLVKNT-AKESPLAFFKG 3
GA + P+DV+KTR + + K+ L KE AF+KG
Sbjct: 231 GAASVYGNTPIDVVKTRMQGLEAKKYKNTLDCAMQIWKKEGFFAFYKG 278
>Z66511-3|CAC42276.1| 712|Caenorhabditis elegans Hypothetical
protein F07A11.2b protein.
Length = 712
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 251 TSHTTLSMNSCFPVGMVGLLIYDTIKISISSASRGGIHL 367
T+ T L++ C P G + + + +T+ SI S GIH+
Sbjct: 456 TADTLLALRYCKPRGALTIGVTNTVGSSICRESHCGIHI 494
>Z66511-2|CAA91315.1| 725|Caenorhabditis elegans Hypothetical
protein F07A11.2a protein.
Length = 725
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 251 TSHTTLSMNSCFPVGMVGLLIYDTIKISISSASRGGIHL 367
T+ T L++ C P G + + + +T+ SI S GIH+
Sbjct: 469 TADTLLALRYCKPRGALTIGVTNTVGSSICRESHCGIHI 507
>Z68336-3|CAA92735.1| 710|Caenorhabditis elegans Hypothetical
protein F22B3.4 protein.
Length = 710
Score = 27.1 bits (57), Expect = 7.8
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +2
Query: 251 TSHTTLSMNSCFPVGMVGLLIYDTIKISISSASRGGIHL 367
T+ T +++ C P G + + + +T+ SI S GIH+
Sbjct: 454 TADTLMALRYCKPRGALTIGVTNTVGSSIGRESHCGIHI 492
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,562,101
Number of Sequences: 27780
Number of extensions: 209583
Number of successful extensions: 429
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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