Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23a16
         (544 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    24   2.8  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   2.8  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   3.7  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   4.9  
AJ970246-1|CAI96718.1|  132|Anopheles gambiae putative reverse t...    23   8.6  
AJ441131-6|CAD29635.1|  152|Anopheles gambiae putative protein p...    23   8.6  
AJ439398-5|CAD28128.1|  152|Anopheles gambiae putative protein p...    23   8.6  

>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 105 YVCKSWCNADIRSGITAPKLIVSPRM 182
           Y+  +W N  I+S  T  K++VSP +
Sbjct: 278 YLTGNWYNYTIQSVSTVNKVVVSPSL 303


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 105 YVCKSWCNADIRSGITAPKLIVSPRM 182
           Y+  +W N  I+S  T  K++VSP +
Sbjct: 278 YLTGNWYNYTIQSVSTVNKVVVSPSL 303


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +1

Query: 211  VSQPVI--KWRKVMLSANAVPFWWHYNFYLPPFNSDEGVTSR 330
            + +P++  KW KV    +A  F +H NF L   N+ + +T +
Sbjct: 1722 IERPILQTKWTKVHPENDAKMFEFHENFILNFDNATQLLTGK 1763


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 384 SCDKTISFVIVSSTFPHR 331
           +CDKT+  V  S + PHR
Sbjct: 267 TCDKTMQRVTTSHSDPHR 284


>AJ970246-1|CAI96718.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 485 YSVRMWIFKMSSXPWMFWKS 544
           YSVRM      S P  FW+S
Sbjct: 110 YSVRMGPHLSRSIPCFFWRS 129


>AJ441131-6|CAD29635.1|  152|Anopheles gambiae putative protein
           protein.
          Length = 152

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 211 VSQPVIKWRKVMLSANAVPFWWH 279
           V  PV KW   +L   A+PF  H
Sbjct: 111 VKGPVGKWGPTLLGLLAIPFIIH 133


>AJ439398-5|CAD28128.1|  152|Anopheles gambiae putative protein
           protein.
          Length = 152

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 211 VSQPVIKWRKVMLSANAVPFWWH 279
           V  PV KW   +L   A+PF  H
Sbjct: 111 VKGPVGKWGPTLLGLLAIPFIIH 133


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,576
Number of Sequences: 2352
Number of extensions: 12463
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)