Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23a16
         (544 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3494|AAF46919.2|  524|Drosophila melanogaster CG3682-PB...    29   4.1  
AE013599-3493|AAF46920.2|  729|Drosophila melanogaster CG3682-PA...    29   4.1  
AE013599-3492|ABI31111.1|  945|Drosophila melanogaster CG3682-PC...    29   4.1  

>AE013599-3494|AAF46919.2|  524|Drosophila melanogaster CG3682-PB,
           isoform B protein.
          Length = 524

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -2

Query: 285 VIMPPKGYSICR*HHFSPFYYRLRYPSLVQQWVASFG 175
           +  PP+G S+   HH+S F Y++  P   + +   FG
Sbjct: 114 ITFPPEGSSLTPAHHYSEFRYKIYAPIAFRYFRDLFG 150


>AE013599-3493|AAF46920.2|  729|Drosophila melanogaster CG3682-PA,
           isoform A protein.
          Length = 729

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -2

Query: 285 VIMPPKGYSICR*HHFSPFYYRLRYPSLVQQWVASFG 175
           +  PP+G S+   HH+S F Y++  P   + +   FG
Sbjct: 114 ITFPPEGSSLTPAHHYSEFRYKIYAPIAFRYFRDLFG 150


>AE013599-3492|ABI31111.1|  945|Drosophila melanogaster CG3682-PC,
           isoform C protein.
          Length = 945

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -2

Query: 285 VIMPPKGYSICR*HHFSPFYYRLRYPSLVQQWVASFG 175
           +  PP+G S+   HH+S F Y++  P   + +   FG
Sbjct: 114 ITFPPEGSSLTPAHHYSEFRYKIYAPIAFRYFRDLFG 150


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,177,718
Number of Sequences: 53049
Number of extensions: 549078
Number of successful extensions: 1189
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)